Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq114 127 1e-24 seq174 118 7e-22 seq41 96.9 2e-15 >seq114 Length=262464 Score = 127 bits (140), Expect = 1e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| |||||||| ||| |||| | || ||||| ||||| |||||||| Sbjct 228742 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAA 228801 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || || ||||| | || | |||||||| || | || || |||||| Sbjct 228802 GATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTT 228861 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | |||||| |||| || |||||||| || ||||||||||| || Sbjct 228862 GTCGATAGTGTCCGACGACTCGACCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTGAC 228921 Query 34966 AAAGATCTGCATG 34978 ||||||||||||| Sbjct 228922 AAAGATCTGCATG 228934 Score = 120 bits (132), Expect = 2e-22 Identities = 154/210 (73%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | |||||||||||||||||||| ||||| || ||||| | || || || Sbjct 228500 AGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGCCCGTCCTCGAGC 228559 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| ||||||||||| || || |||||||| | || | ||||||||||| | || Sbjct 228560 TGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATC 228619 Query 34892 TTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTT 34947 || ||||| || | ||||| ||| | |||||| || | || |||||||| Sbjct 228620 TTCGCCTTGAC--AT--TGTCGATGGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTT 228675 Query 34948 TCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||||||||| || ||||| ||||| Sbjct 228676 GCCGGTGAGGGTCTTGACGAAGATTTGCAT 228705 Score = 89.7 bits (98), Expect = 3e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | |||| ||||||||| ||||| ||||| || ||| ||||| | || Sbjct 228950 AGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCC 229009 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCT 34864 || || ||||| ||||||||||||| || ||||||||| Sbjct 229010 TCGAGCTGCTTCCCGGCGAAGATCAAACGCTGCTGGTCT 229048 >seq174 Length=181799 Score = 118 bits (130), Expect = 7e-22 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 34770 CCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCA 34829 ||| ||||| ||| ||||| || ||||| || ||||| ||| | || |||| || | Sbjct 44871 CCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTCCGGCCATCCTCGA 44930 Query 34830 GTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTA 34889 | ||||| || |||||||| || || |||||||| | || | |||||||| || | | Sbjct 44931 GCTGCTTCCCTGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGA 44990 Query 34890 TTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTC 34949 | || |||||| | |||| || | |||||| |||| ||| |||||||||| Sbjct 44991 TCTTCGCCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCAAGGGTGATGGTCTTTC 45050 Query 34950 CCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| |||||||| || || |||||||| Sbjct 45051 CCGTTAGGGTCTTAACGAAAATCTGCAT 45078 Score = 116 bits (128), Expect = 2e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || || |||| |||| || || ||||| |||||||| Sbjct 45624 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAA 45683 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || || || || | || | ||||||||||| | || || |||||| Sbjct 45684 GATGAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTT 45743 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || | |||||| || | ||| || ||||| |||||||||||||| || Sbjct 45744 GTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTGAC 45803 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 45804 GAAGATCTGCAT 45815 Score = 98.7 bits (108), Expect = 6e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | | |||||| || || | ||| ||| ||||| ||||| || |||| Sbjct 45078 TTCCTCCACGGAGACGCAGGACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCCG 45137 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || |||| |||| || || || || ||||| ||||| || || || ||||| | | Sbjct 45138 AGAGCGTGCGACCATCCTCGAGCTGTTTGCCGGCAAAGATAAGACGCTGTTGGTCGGGAG 45197 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||||||||| | || || || ||| | || | || | ||||| Sbjct 45198 GGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCGGATGACTCGA 45257 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || |||||||| || || || ||||| |||||||||||||| Sbjct 45258 CCTCGAGAGTGATGGTCTTGCCAGTAAGCGTCTTGACAAAGATCTGCAT 45306 >seq41 Length=470795 Score = 96.9 bits (106), Expect = 2e-15 Identities = 80/98 (82%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 242669 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCT 242728 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || ||||| |||||||||||||| || |||||||| Sbjct 242729 TCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTC 242766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325685202604766