Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq174 125 1e-23 >seq174 Length=181799 Score = 125 bits (138), Expect = 1e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || ||| || || | ||| ||||| || || ||||| ||||| || || | Sbjct 45306 TACCACCACGCAGACGAAGGACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGG 45365 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || || || || || || ||||||||||| || | ||||| || |||| Sbjct 45366 AAAGCGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAG 45425 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || |||||||| ||||||||||| || || || || || || || | ||| | Sbjct 45426 GGATGCCCTCCTTATCCTGAATCTTTGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAA 45485 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || || |||||||| |||| ||||| || || || ||||| Sbjct 45486 CCTCGAGGGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 45534 Score = 107 bits (118), Expect = 4e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 ||||| || || || ||||| || || || || || ||| | | || || || || || Sbjct 45613 TGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGC 45672 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || || ||||| || | |||||||| ||||| || || ||||| || || ||||| Sbjct 45673 TTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCCTGGATCTTC 45732 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || || || || || ||||| || || || || || | || ||||||||||| || Sbjct 45733 GCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATCGTCTTGCCCGTG 45792 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 | ||||| || || ||||||||| Sbjct 45793 AGGGTCTTGACGAAGATCTGCATT 45816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981803122528846