Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq174 87.8 4e-12 >seq174 Length=181799 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| ||||| || || || || |||||| | || || || || ||| Sbjct 45303 CAGATCTTTGTCAAGACGCTTACTGGCAAGACCATCACTCTCGAGGTCGAGTCATCCGAC 45244 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || || || || || ||| || Sbjct 45243 ACCATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAACAG 45184 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||| ||||| || ||| | || ||||| | || | | ||||||||| || Sbjct 45183 CGTCTTATCTTTGCCGGCAAACAGCTCGAGGATGGTCGCACGCTCTCGGATTACAACATC 45124 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||||||||| ||||| || || || Sbjct 45123 CAGAAAGAGTCCACTCTGCATCTCGT 45098 Score = 86.0 bits (94), Expect = 1e-11 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || |||||||| | || || || ||| ||| Sbjct 45812 CAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTCGAGTCTTCGGAC 45753 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || ||| || || || Sbjct 45752 ACGATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCCGATCAACAG 45693 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| |||||| | || ||||| | ||| | |||| |||||| || Sbjct 45692 CGCCTCATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATC 45633 Query 206353 CAGAAAGAGTCTACTCTTCACCTTG 206377 ||||| ||||| || || || |||| Sbjct 45632 CAGAAGGAGTCGACGCTGCATCTTG 45608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181791818060794