Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq173 324 2e-82 seq362 260 2e-63 seq16 113 6e-19 seq144 102 1e-15 seq3 86.0 9e-11 >seq173 Length=183199 Score = 324 bits (358), Expect = 2e-82 Identities = 405/542 (75%), Gaps = 15/542 (3%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||||||||| || || ||||| || |||||| | |||| Sbjct 160832 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACAGCGGAGGAGATGGACC 160890 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891 | | |||| ||| ||||| | ||| | |||| |||| || || |||||| Sbjct 160891 TGTCCAAGGACATGGTTGACTGGAACACCAAGCTCAACGACAACGAACGTCACTTCATCT 160950 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 |||||||||||||| || ||| || |||||| ||||| ||||||||| | | Sbjct 160951 CCCACGTCCTCGCCTTCTT-CGCTGCGTCCGATGGTATCGTCAACGAGAACCTCGTTGAG 161009 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || ||| ||||||||| | ||||| || | || ||||| ||||||||| Sbjct 161010 CGGTTCTCGAACGAGGTCCAAGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATG 161069 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| || |||||||| ||||| |||||||||||| |||||||||| Sbjct 161070 ATGGAGAACATCCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGACCCC 161129 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 || || || ||||||| |||| |||| || | || | | | ||| |||||| Sbjct 161130 GTGCAGCGCGAGTACCTCTTCGACGCCGTCGAGACCATCCCTTGCATCAAGAAGAAGGCC 161189 Query 1456132 GACTGGGCGATGAAGTGGATCAACAAGGAGGGC--CTCGACACTTTGCCGAGCGGCTCGT 1456189 |||||||| |||||||||||| || || | | || || ||| || || || ||||| Sbjct 161190 GACTGGGCCATGAAGTGGATC-TCA--GATGACAAGTCCAC-CTTCGCTGAACGCCTCGT 161245 Query 1456190 CGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTGGC 1456247 || |||||||| ||||||||||||||| ||||||||| || |||| ||||||| |||| Sbjct 161246 CGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCCTT-TGCGTCCATCTTCTGGC 161304 Query 1456248 TCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGAC 1456307 ||||||||||||| ||||||||||| | || ||| |||||| | ||||| |||||| Sbjct 161305 TCAAGAAGCGCGGTCTCATGCCCGG-CCTCACCTTCTCCAACGAGCTCATCAGCCGCGAC 161363 Query 1456308 GA 1456309 || Sbjct 161364 GA 161365 Score = 192 bits (212), Expect = 8e-43 Identities = 374/540 (69%), Gaps = 12/540 (2%) Strand=Plus/Minus Query 1455742 CCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCG 1455801 ||| || ||||| |||||||| | ||||| || ||| | ||| || |||||| Sbjct 159740 CCGGTTCGTCCTCTTCCCCATACAATACCATGAAATTTGGTCCCTCTAC-AAGAAGGCCC 159682 Query 1455802 AGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGC-CGACACGGTCCACTGGGTG 1455860 | ||||||||||||||||||||||| | |||||| ||| ||||| || ||| Sbjct 159681 AAGCCTCCTTTTGGACCGCCGAGGAAATGGACCTCT-CGCTCGACATACAGCATTGGCGC 159623 Query 1455861 TCGC---TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGC 1455917 | | | | | | ||||| || || ||| ||||||||| ||||| || |||||| Sbjct 159622 ACCCGCCTAACCCCTAATGAGCGGCACTTTATCTCGCACGTCCTTGCCTTCTT-CGCCGC 159564 Query 1455918 CAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCC 1455977 | || ||||||||| ||||||||| | | |||||| ||| |||||| | | | Sbjct 159563 CTCGGACGGCATCGTGAACGAGAACCTCGTTGAGCGCTTTTCGAACGAGGTCAAGGTCGC 159504 Query 1455978 AGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTA 1456037 || || || | || ||||| | |||||| |||| ||| ||||||| || || || Sbjct 159503 CGAAGCGCGGTGCTTCTACGGCTATCAGATCATGGTCGAGAACGTCCACTCCGAGACATA 159444 Query 1456038 CTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGC 1456097 ||| ||||| |||||||| || ||||| ||| |||| | || | || | ||| Sbjct 159443 CTCCCTCCTCATCGACACGCTGATCCAGGACTCGGCCGAGCGTGCGTACTTGTTCCACGC 159384 Query 1456098 CATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAA 1456157 || || || | |||| | | ||| ||||| || ||||| | ||||||| | | Sbjct 159383 AATAGAGACCATCCCGTGTATCAAGAAGAAGGCGGAGTGGGCCCTCCGGTGGATCTCCGA 159324 Query 1456158 GGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGCG-TCGAGGGCATCTTT 1456216 | | || ||||| || || ||||| || || | || |||||| |||||||||| || Sbjct 159323 CGCGCGC-TCGACG-TTCGCGGAGCGACTGGTAGCGTTCGCCGCGGTCGAGGGCATTTTC 159266 Query 1456217 TTCTCGGGCAGTTTCTGC-GCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||||||| || ||| ||| || ||||| |||||||| || || |||||||| || Sbjct 159265 TTCTCGGGCTCCTT-TGCAAGCATTTTCTGGCTGAAGAAGCGTGGGCTGATGCCCGGGCT 159207 Score = 114 bits (126), Expect = 2e-19 Identities = 178/247 (72%), Gaps = 8/247 (3%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| || ||||||| |||||| | ||||| ||| || |||| ||| | Sbjct 161442 ATCATCACGGACGCCGTCGCCATCGAGCAGGAGTTCCTCACGGAAGCGCTCCCGTGCAAG 161501 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 ||||||||||||||| | | ||||||||||||||||| | | || ||||| ||||||| Sbjct 161502 CTCATCGGCATGAACTCGGAC-CTCATGTGCCAGTACATCG-AGTTCGTCGCGGACCGCC 161559 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACG--GCCAACCCGTTCCCATGGA 1456700 |||||| | | ||||| | || ||| ||| ||| | ||||| ||| | | Sbjct 161560 TGCTCGTGTCCCTCGGAAAC-GACAAGGTGTAC--AACGTCACGAACCCCTTCGACTTCA 161616 Query 1456701 TGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGTACG 1456759 |||| ||||||| || |||||||||| ||||| |||||| |||||| | || ||| Sbjct 161617 TGGACATGATCTCCCTGCAGGGCAAGACGAACTTCTTCGAGAAGCGCGTGTCGGACTACT 161676 Query 1456760 CCAAGGC 1456766 | ||||| Sbjct 161677 CGAAGGC 161683 >seq362 Length=48712 Score = 260 bits (288), Expect = 2e-63 Identities = 389/541 (72%), Gaps = 16/541 (3%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||||||||| || || ||||| || ||| || | |||| Sbjct 46494 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACAGCGGAGAAGATGGACC 46436 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891 | | |||| |||| ||||| | ||| | |||| |||| || || |||||| Sbjct 46435 TGTCCAAGGACATGGTCGACTGGAACACCCAGCTCAACGACAACGAACGTCACTTCATCT 46376 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 |||||||||||||| || ||| || ||| ||||||| ||||||||| | | Sbjct 46375 CCCACGTCCTCGCCTTCTT-CGCTGCGTCGGATAGCATCGTCAACGAGAACCTCGTTGAG 46317 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || ||| ||||||||| | ||||| || | || ||||| ||||||| | Sbjct 46316 CGGTTCTCGAACGAGGTCCAAGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGACCATG 46257 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || | ||| ||||| || |||||||| ||| || || |||||| ||| |||||| Sbjct 46256 ATGGACACCATTCACTCCGAGACCTACTCCCTC---ATTGATACCTACATCACGGACCCC 46200 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 | || || ||||||| |||| |||| || | |||| | | ||| |||||| Sbjct 46199 GCACAGCGCGAGTACCTCTTCGACGCCGTCGAGACCATCCCGTGCATCAAGAAGAAGGCC 46140 Query 1456132 GACTGGGCGATGAAGTGGATCAACAAGGAGGGCC--TCGACACTTTGCCGAGCGGCTCGT 1456189 |||||||| |||||||||||| || || | | || || ||| || ||||| ||||| Sbjct 46139 GACTGGGCCATGAAGTGGATCT-CA--GATGACAAGTCCAC-CTTCGCTGAGCGCCTCGT 46084 Query 1456190 CGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCT 1456248 || ||||| | | ||| |||||||||||||||||||| ||| | ||||| ||||| Sbjct 46083 CGCCTTTGTCACCGTCAAGGGCATCTTTTTCTCGGGCTCCTTCGCATCGATCTTCTGGCT 46024 Query 1456249 CAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACG 1456308 |||||| ||||| ||||||||||| | || ||| || ||| | ||||| ||||||| Sbjct 46023 CAAGAAACGCGGTCTCATGCCCGG-CCTCACCTTCTCCACCGAGCTCATCAGCCGCGACG 45965 Query 1456309 A 1456309 | Sbjct 45964 A 45964 >seq16 Length=626006 Score = 113 bits (124), Expect = 6e-19 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 165757 TGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGG 165816 || || ||||||||||| |||| |||||||| |||||| |||| ||||||||||| | | Sbjct 299524 TGATCTCGTGGGGCGCCATCGGCGCGCGCACGACCGAGTCCCAGCTGCACCGCGAGCTCG 299465 Query 165817 CGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCGTGGCGACGG 165876 | |||| || | | ||||| |||||||| ||| ||||||||||| || || | Sbjct 299464 CCTCGGGCGTGTCCTTCCCCATCGGCTTCAAGAACGGCACCGACGGCGGCACCGCCGTCG 299405 Query 165877 CCCTCGATGCCGTGCGCACTGCCGCCCAGCCACACACCTT 165916 | |||| ||| ||||| | |||||| ||| ||| |||| Sbjct 299404 CGATCGACGCCATGCGCGCCGCCGCCGCGCCGCACGCCTT 299365 >seq144 Length=208183 Score = 102 bits (112), Expect = 1e-15 Identities = 91/110 (83%), Gaps = 3/110 (3%) Strand=Plus/Plus Query 1456168 GACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCA 1456226 ||| ||| || ||||| |||||| ||||||||| ||||||| |||||| ||||||||| Sbjct 50500 GACCCTTCGCTGAGCGCCTCGTCACCTTTGCCGCCGTCGAGGTCATCTTCTTCTCGGGCT 50559 Query 1456227 GTTTCTGCG-CCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||| ||| ||||||| ||||| ||||||||||| ||||||| ||| || Sbjct 50560 CCTTC-GCGTCCATCTTCTGGCTGAAGAAGCGCGGTCTCATGCACGGCCT 50608 >seq3 Length=923071 Score = 86.0 bits (94), Expect = 9e-11 Identities = 105/142 (74%), Gaps = 1/142 (1%) Strand=Plus/Minus Query 165750 GCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGC 165809 || ||||| || ||||||||||| |||| |||||||| || ||| |||||||||||| Sbjct 531209 GCGGACCTCGTGTCGTGGGGCGCCATCGGCGCGCGCACGACGGAGTCGCAGGTGCACCGC 531150 Query 165810 GAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCGTG 165869 ||| | || |||||| | |||||| |||||||| ||| || ||||| | ||| Sbjct 531149 GAGCTCACGAGCGCGCTGTCCATGCCCACGGGCTTCAAGAACTCGACGGACGGGACGGTG 531090 Query 165870 GCGACGGCCCTCGATGCCGTGC 165891 | | ||| |||| | ||||| Sbjct 531089 GGCATCGCCATCGACG-CGTGC 531069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177626591182068