Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq114 107 2e-18 seq174 100 3e-16 >seq114 Length=262464 Score = 107 bits (118), Expect = 2e-18 Identities = 151/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 35527 CACCAAA-TGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGT 35585 |||||| || | ||| |||||||| ||||||||||| ||| || || ||| |||| | Sbjct 228495 CACCAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGCCCGTCCT 228554 Query 35586 CCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCA 35645 | |||||||| || || || || | ||||||||||| | || | || |||||||||| Sbjct 228555 CGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCT 228614 Query 35646 TGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 |||||| ||| | | | | | ||||| ||| || ||||| | |||||| || | Sbjct 228615 GGATCTTCGCCTTGACATTGTCGATGGTGTCAGACGACTCGACCTCGAGCGTGATGGTCT 228674 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || || | || || || || || ||||| Sbjct 228675 TGCCGGTGAGGGTCTTGACGAAGATTTGCAT 228705 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || |||| ||||||||||| || || || Sbjct 228742 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAA 228801 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||| ||||| | || | || |||||| ||| |||||| ||| | || Sbjct 228802 GATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGA-CGT 228860 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| ||| || ||||| | |||||| || || || || | || || | Sbjct 228861 TGTCGATAGTGTCCGACGACTCGACCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTGA 228920 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 228921 CAAAGATCTGCAT 228933 >seq174 Length=181799 Score = 100 bits (110), Expect = 3e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||| ||||||||||| | | ||| || | || || |||||||| || || || Sbjct 44888 TCCTTTTGGATGTTGTAATCCGAGAGGGTCCGGCCATCCTCGAGCTGCTTCCCTGCGAAG 44947 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||| | ||| | | |||||| ||| |||||| ||| | ||| Sbjct 44948 ATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGATCTTCGCCTTGA-CGTT 45006 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||||| ||| || ||||| | ||||| || || ||||| | || || || Sbjct 45007 GTCAATCGTGTCCGACGACTCGACCTCAAGGGTGATGGTCTTTCCCGTTAGGGTCTTAAC 45066 Query 35725 AAATATCTGCATTC 35738 || |||||||||| Sbjct 45067 GAAAATCTGCATTC 45080 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || || | || || ||||| || || ||||| Sbjct 45115 CTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGACCATCCTCGAGCTGTTTGCCGGCAAA 45174 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||| ||||| | ||| | || |||||||||| ||||| ||||| || Sbjct 45175 GATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCA-CGT 45233 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||| | ||||| || || || || | || || | Sbjct 45234 TGTCGATGGTGTCGGATGACTCGACCTCGAGAGTGATGGTCTTGCCAGTAAGCGTCTTGA 45293 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 45294 CAAAGATCTGCAT 45306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450782814763120