Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq114 129 6e-25 seq174 125 7e-24 seq41 87.8 2e-12 >seq114 Length=262464 Score = 129 bits (142), Expect = 6e-25 Identities = 160/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| || ||||| |||||| ||||| |||||||||||||||| | ||| | Sbjct 228490 AGACGCACCA--AGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGC 228547 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || || || | |||||||| ||||| || ||||| || Sbjct 228548 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCC 228607 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | ||||| ||||| || || ||||| || Sbjct 228608 TTGTCCTGGATCTTCGCCTTGACATTGTCGATGGTGTCAGACGACTCGACCTCGAGCGTG 228667 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| | || || ||||| |||||||| Sbjct 228668 ATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 228705 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| || | ||||| || || || || ||||| || ||||||||||| Sbjct 228707 CCTCCACGGAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAG 228766 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| || ||||| ||||| || || || | ||||| || ||||| || Sbjct 228767 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGG 228826 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | ||||| ||||| || || Sbjct 228827 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATAGTGTCCGACGACTCGACC 228886 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || ||||| | || || || || || ||||| Sbjct 228887 TCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 228933 Score = 89.7 bits (98), Expect = 5e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| || | ||||| || || ||||| ||||| || |||||||||||| Sbjct 228935 CCTCCACGGAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 228994 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| |||||||| || || || || |||||||||||||| || || || Sbjct 228995 AGGGTGCGCCCGTCCTCGAGCTGCTTCCCGGCGAAGATCAAACGCTGCTGGTCTGGGGGG 229054 Query 134607 ATGC 134610 |||| Sbjct 229055 ATGC 229058 >seq174 Length=181799 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | ||| |||| ||||| || || ||||| || || || |||||||| || Sbjct 45078 TTCCTCCACGGAGACGCAGGACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCCG 45137 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| || || |||||||||||||| ||||| || | |||||| || ||||| | Sbjct 45138 AGAGCGTGCGACCATCCTCGAGCTGTTTGCCGGCAAAGATAAGACGCTGTTGGTCGGGAG 45197 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||| || || || ||||| || || || ||| | |||||||| || || | Sbjct 45198 GGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCGGATGACTCGA 45257 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | |||||||| ||||| || || || | || || || || || ||||| Sbjct 45258 CCTCGAGAGTGATGGTCTTGCCAGTAAGCGTCTTGACAAAGATCTGCAT 45306 Score = 118 bits (130), Expect = 1e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || |||||||||||||| |||||||| || | ||| | || |||||||| Sbjct 44875 GTGAAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTCCGGCCATCCTCGAGCTG 44934 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || ||||| || || | ||||||||| ||||| || || || || || || || || || Sbjct 44935 CTTCCCTGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGATCTT 44994 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| ||| | ||||| ||||| || || || || || ||||| || || || Sbjct 44995 CGCCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCAAGGGTGATGGTCTTTCCCGT 45054 Query 134690 TAAAGTTTTAACGAAAATTTGCATT 134714 || || ||||||||||| |||||| Sbjct 45055 TAGGGTCTTAACGAAAATCTGCATT 45079 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 || || ||||| || ||||| || |||||||||||| || ||| | || || ||| Sbjct 45610 AGATGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGC 45669 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || ||||| || || || | ||||| |||||||| || ||||| || || || || || Sbjct 45670 TGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCCTGGATC 45729 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||||| ||| | ||||| || || || || ||||| || || || || || Sbjct 45730 TTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATCGTCTTGCCC 45789 Query 134688 GTTAAAGTTTTAACGAAAATTTGCATT 134714 || | || || ||||| || |||||| Sbjct 45790 GTGAGGGTCTTGACGAAGATCTGCATT 45816 >seq41 Length=470795 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || ||||| ||||| || |||||||||||| | |||| || Sbjct 242663 AGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGA 242722 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTAT 134608 || |||||||| ||||| || || |||| ||||||||| ||||| || || Sbjct 242723 CCATCTTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGAAT 242775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505386308343280