Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq173 104 3e-17 seq6 86.0 9e-12 >seq173 Length=183199 Score = 104 bits (114), Expect = 3e-17 Identities = 161/229 (70%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 39638 CCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTT 39697 ||||| || | || || | ||||| || || ||||| || ||||| ||||| ||||| Sbjct 161368 CCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCGCGCTTC 161309 Query 39698 TTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAAT 39757 |||||||| || |||| ||||| || || || ||||||||||| || || || ||||| Sbjct 161308 TTGAGCCAGAAGATGGACGCAAAGGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCAAAG 161249 Query 39758 GCAACAAGTCTCTCTCCGTA-----ACTTGTATCATTATGTATCCACTTCTGTGCCCAAT 39812 || || || | || || | ||||| |||| ||||||||| ||||| | Sbjct 161248 GCGACGAGGCGTTCAGCGAAGGTGGACTTG--TCATCTGAGATCCACTTCATGGCCCAGT 161191 Query 39813 CAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATA 39861 | || |||||||| | ||||| || || || | || | ||||| || Sbjct 161190 CGGCCTTCTTCTTGATGCAAGGGATGGTCTCGACGGCGTCGAAGAGGTA 161142 >seq6 Length=777208 Score = 86.0 bits (94), Expect = 9e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 39631 ATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACC 39690 ||| | ||||||||||||||| || | |||||| ||||| || | || ||||| | || Sbjct 82561 ATGCATGCCCTCATCTCTACTGATGAGTTCGTTGGAAAACGTCAAACCGGGCATCAATCC 82502 Query 39691 ACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTAC 39747 ||||| || ||||| ||||||| || ||||| || || ||||| || || || || Sbjct 82501 CCGCTTCTTCAGCCAGTATATGGCGGCGAAAGAGCCTGAGAAGAAAATACCCTCCAC 82445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686892365706960