Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq6 131 1e-25 seq173 89.7 4e-13 >seq6 Length=777208 Score = 131 bits (144), Expect = 1e-25 Identities = 381/574 (66%), Gaps = 16/574 (3%) Strand=Plus/Plus Query 43720 ATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGA 43779 ||||| | | |||||| | |||||||| |||||||| || |||||||| || || || Sbjct 82013 ATATCTT-AGATATGGGAGATGTACAAGCGTGCACAGGCATCGTTTTGGACTGCGGAGGA 82071 Query 43780 AGTTGATTTGACTAAAGACTTAG-CAC-ATTGGATTGCATTAAAACCACAA-GAA--AAA 43834 ||| || ||| | || || ||| ||| | |||| | |||| || ||| ||| Sbjct 82072 AGTCGACTTGTCCAAGGA--TAGACACGACTGGACGACC--AAAATGACGGCGAACGAAA 82127 Query 43835 CATTTT--ATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAA 43892 ||| | ||||| | | | | |||||||| || || || || ||| ||| | Sbjct 82128 GATTCTTCATATCACGGATACTCGGTTTTTTTGCCGCATCTGATGGCATCGTCGTTGAGA 82187 Query 43893 ATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGT 43952 | | || ||| ||| ||||| || |||| || || || || || ||||||| Sbjct 82188 ACCTCGTCGAGATGTTCGCGTCTGAAGTGCAGATACCGGAGGCTCGGTGCTTCTATGGGT 82247 Query 43953 TTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACA 44012 |||| ||||| || || || || ||||| || |||||| || || || || ||| || Sbjct 82248 TTCAGATTGCGATGGAGAACATACATTCTGAGATGTACTCGCTCCTCATCGACACGATCA 82307 Query 44013 TCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTA 44072 || ||| || | ||||||| || | | | || || | || | ||| Sbjct 82308 TCGTCGATAGGGATGAGAAGCTTCACCTACTGAGCGCCGCCGAGTGTTTTCCGTCTATTC 82367 Query 44073 AACATAAAGCAGACTGGGCCCTTAAATGGATAAATT-CAAATGATTCTTTTGGAGA-ACG 44130 | | ||||||| ||||| || ||||| | | | || || | || | | ||| Sbjct 82368 GAGACAAAGCAGCGTGGGCGCTACGTTGGATCAGTCGCGAA--ATCCCGTTCAAAACACG 82425 Query 44131 ACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATT 44190 || | || || || || ||||| || |||||||| ||||| || || || ||||||| Sbjct 82426 TCTGATAGCTTTCGCGGTGGTGGAGGGTATTTTCTTCTCAGGCTCTTTCGCCGCCATATA 82485 Query 44191 TTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCG 44250 ||| | ||||| || || |||||||| || ||||||||||| || || | || ||| | Sbjct 82486 CTGGCTGAAGAAGCGGGGATTGATGCCCGGTTTGACGTTTTCCAACGAACTCATCAGTAG 82545 Query 44251 TGATGAAGGCTTACATTGCGATTTTGCTTGCTTG 44284 ||||| ||| | ||| |||||||| || ||| Sbjct 82546 AGATGAGGGCATGCATACAGATTTTGCATGTTTG 82579 >seq173 Length=183199 Score = 89.7 bits (98), Expect = 4e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 44126 GAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCC 44185 || ||||| || ||||| || | || || ||||||||||| || || || ||||| | Sbjct 159304 GAGCGACTGGTAGCGTTCGCCGCGGTCGAGGGCATTTTCTTCTCGGGCTCCTTTGCAAGC 159245 Query 44186 ATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATA 44245 || || ||| | ||||| || || ||||||| ||| | || || || || ||| | ||| Sbjct 159244 ATTTTCTGGCTGAAGAAGCGTGGGCTGATGCCCGGGCTAACATTCTCCAACGAGCTGATA 159185 Query 44246 AGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGG 44292 ||||| || || || | ||| || ||||| ||| |||| |||| Sbjct 159184 AGTCGGGACGAGGGGATGCATACTGACTTTGCCTGCATGTTGTTTGG 159138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397446728593570