Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq173 129 2e-24 >seq173 Length=183199 Score = 129 bits (142), Expect = 2e-24 Identities = 359/542 (66%), Gaps = 13/542 (2%) Strand=Plus/Plus Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396 || ||||| ||||||||| || || ||||||||| ||| || |||||| || | Sbjct 160866 TTCTGGACAGCGGAGGAGATGGACCTGTCCAAGGACATGGTTGACTGGAAC--ACCAAGC 160923 Query 443397 TCTAG--CCATGAACGCGATTTCTTCAAATGCATCTTGGCCTTCTTTGCACCGAGCGACG 443454 || | | | ||||| | ||| || | || | |||||||| || || ||| | Sbjct 160924 TCAACGACAACGAACGTCACTTCATCTCCCACGTCCTCGCCTTCTTCGCTGCGTCCGATG 160983 Query 443455 GTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAAT-GGTAGTGTACACCGAGGCC 443513 |||||||| ||||| || || ||| |||| |||| ||| | |||||||| Sbjct 160984 GTATCGTCAACGAGAACCTCGTTGAGCGGTTCT-CGAACGAGGTCCAAGCCGCCGAGGCC 161042 Query 443514 CGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAG 443573 |||| |||||||| ||||| | ||||||||||| ||| ||||| |||| | Sbjct 161043 CGCTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTC 161102 Query 443574 TTGATCAAGACACTAATTCCGAACGAAGACGAACAGCG---GTCCATCTTCTCATCGTTC 443630 | ||| | || ||| || || || || ||||| || | ||||| | || Sbjct 161103 CTCATCGACAC-CTACATC--AAGGACCCCGTGCAGCGCGAGTACCTCTTCGACGCCGTC 161159 Query 443631 ATGACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGAA 443690 ||||| || |||||| | ||| | |||||| | ||||| || | || Sbjct 161160 GAGACCATCCCTTGCATCAAGAAGAAGGCCGACTGGGCCATGAAGTGGATCTCAGATGAC 161219 Query 443691 AATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGC 443750 || || ||||| || || || ||||| ||||| | ||||| || | || || Sbjct 161220 AAGTCCACCTTCGCTGAACGCCTCGTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCG 161279 Query 443751 GGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTT 443810 ||| |||| || |||||||||||| | || ||||| || || |||| ||| || ||||| Sbjct 161280 GGCTCCTTT-GCGTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTCACCTT 161338 Query 443811 TAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTA 443870 ||||| || ||||| || |||||||| |||| |||||| || || || |||| Sbjct 161339 CTCCAACGAGCTCATCAGCCGCGACGAGGGGATGCACACCGACTTTGCATGCCTGCTCTT 161398 Query 443871 CA 443872 || Sbjct 161399 CA 161400 Score = 91.5 bits (100), Expect = 5e-13 Identities = 118/162 (73%), Gaps = 1/162 (1%) Strand=Plus/Minus Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTT 443759 |||| |||||||| || || || || | |||||| || | || || ||| |||| Sbjct 159310 TTCGCGGAGCGACTGGTAGCGTTCGCCGCGGTCGAGGGCATTTTCTTCTCGGGCTCCTTT 159251 Query 443760 AGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGA 443819 || ||| |||||| |||| |||||||| || |||| ||| || || || ||||| Sbjct 159250 -GCAAGCATTTTCTGGCTGAAGAAGCGTGGGCTGATGCCCGGGCTAACATTCTCCAACGA 159192 Query 443820 ACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTG 443861 ||||| |||||||||||||| ||||| ||||| ||||| Sbjct 159191 GCTGATAAGTCGGGACGAGGGGATGCATACTGACTTTGCCTG 159150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588297049037730