Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq173 122 1e-22 seq92 100 4e-16 >seq173 Length=183199 Score = 122 bits (134), Expect = 1e-22 Identities = 354/536 (66%), Gaps = 18/536 (3%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 |||||| || |||||||| |||||||| ||||| || | ||| || | ||||| Sbjct 161674 TAGTCCGACACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGGGAGATCATGTCCATG 161615 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAATGG-GTGGCACCCCA---ACTTGTTTGAGGAG 122486 ||||| || || ||| | |||| | | || | || | || | || || Sbjct 161614 AAGTCGAAGGGGTTCGTGACGTTGTACACCTTGTCGTTTCCGAGGGACACG----AGCAG 161559 Query 122487 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTT 122546 || |||| || |||| ||||||| | |||| || |||||||| |||||||| || Sbjct 161558 GCGGTCCGCGACGAACTCGATGTACTGGCACATGAGGTCCGAGTTCATGCCGATGAGCTT 161499 Query 122547 ACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGC 122606 || ||||| || ||| || |||| | | ||| || | || || || | | |||| Sbjct 161498 GCACGGGAGCGCTTCCGTGAGGAACTCCTGCTCGATGGCGACGGCGTCCGTGATGATGCG 161439 Query 122607 GTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCT-TGAAGAGCTCCACGGCAAACT 122665 | ||| || |||| ||| | | | || |||||||| ||||| | Sbjct 161438 GCGGACGGTGTCGGG-GTGCGCGCGGCGCTTGAGGTGGCTGAAGAGCAGGCATGCAAAGT 161380 Query 122666 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGA 122725 | ||| | ||||| || ||| || || || || |||||| || || ||||||| Sbjct 161379 CGGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGA 161320 Query 122726 GACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCC 122784 |||| |||||||| | ||| | || | |||| || || || ||||||||||| ||||| Sbjct 161319 GACCGCGCTTCTTGAGCCAGAAGATGGACGCA-AAGGAGCCCGAGAAGAAGATGCCCTCG 161261 Query 122785 ACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATC---AAACCAT 122841 || ||||| || | |||||||| ||||||| | ||||| |||| | ||| Sbjct 161260 ACGGCGGCAAAGGCGACGAGGCGTTCAGCGAAGGTG---GACTTGTCATCTGAGATCCAC 161204 Query 122842 TTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 122897 ||||| ||||| | |||||||||| || || || | || | || ||| || || Sbjct 161203 TTCATGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGACGGCGTCGAA 161148 >seq92 Length=307622 Score = 100 bits (110), Expect = 4e-16 Identities = 174/253 (69%), Gaps = 0/253 (0%) Strand=Plus/Minus Query 111824 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 111883 ||||||| || |||||| || ||||| || ||| ||||| | | || || Sbjct 59762 TGGATGTTCAGCCCAATGCCACCAGCGGTTTTGCTGATCATGGCACAGCTCTTGAGCGTG 59703 Query 111884 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 111943 | ||||| || | || ||| || || ||||||| |||||||| || ||||| ||| Sbjct 59702 TCGTAGATGCCTTCAATGCTGTCGTCTTTCATGGCGATGAGGAAGCAGCTCGACATTTGC 59643 Query 111944 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGAC 112003 || ||||| || || |||||||| || || | |||||| |||| || || ||| Sbjct 59642 GGGTGCGGTGTGCCGGCGTTGAAGAGCGTGGGGGATGCGTGCGTGAAGTAACGTTCAGAC 59583 Query 112004 ATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACC 112063 ||| ||| ||| ||||| | ||| || | ||| |||||||| || | |||||| Sbjct 59582 ATCATGTTGTACGTCTCGAGGACGTGCTCGAGGTCAGAACCGTGGATACCAACGGCGACC 59523 Query 112064 CGCATGAACATGT 112076 ||||||| || || Sbjct 59522 CGCATGAGCAAGT 59510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628016974334400