Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq173 192 7e-44 seq362 161 1e-34 seq92 104 3e-17 seq128 86.0 8e-12 >seq173 Length=183199 Score = 192 bits (212), Expect = 7e-44 Identities = 541/818 (66%), Gaps = 27/818 (3%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 |||||| || ||||||||||||||||| ||||| || | || | ||| | ||||| Sbjct 161674 TAGTCCGACACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGGGAGATCATGTCCATG 161615 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA--TTGCTGGCACTCCAATCTGTTTGAGGAGAC 129845 || || || |||||| | ||| | | ||| | ||| | ||| || | Sbjct 161614 AAGTCGAAGGGGTTCGTGACGTTGTACACCTTGTCGTT--TCCGAGGGACACGAGCAGGC 161557 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 | |||| |||| |||| ||||||| |||| || |||||||| |||||||| || | Sbjct 161556 GGTCCGCGACGAACTCGATGTACTGGCACATGAGGTCCGAGTTCATGCCGATGAGCTTGC 161497 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 | |||||||| ||| || |||| ||| ||| ||| | || || ||| | |||| | Sbjct 161496 ACGGGAGCGCTTCCGTGAGGAACTCCTGCTCGATGGCGACGGCGTCCGTGATGATGCGGC 161437 Query 129966 GAATGGTCTCCG--TGCCAG-GTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GCAA 130019 | | ||| || | ||| | | | ||| | | || |||||| || | |||| Sbjct 161436 GGACGGTGTCGGGGTGCGCGCGGCGCTTGAGGT--GGCT-GAAGAG---CAGGCATGCAA 161383 Query 130020 ACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCA 130079 | || ||| | |||||||| ||| |||||| || || |||||| || || |||| Sbjct 161382 AGTCGGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCA 161323 Query 130080 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCT 130139 ||||||| |||||||| | |||||| || | ||| ||||| ||||||||||| |||| Sbjct 161322 TGAGACCGCGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCCGAGAAGAAGATGCCCT 161263 Query 130140 CCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC---AAACC 130196 | || || || || | ||| || ||||| |||| |||||| ||| | || Sbjct 161262 CGACGGCGGCAAAGGCGACGAGGCGTTCAGCGAAGG---TGGACTTGTCATCTGAGATCC 161206 Query 130197 ACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA 130256 ||||||| ||||| | ||||| |||| ||| || |||| ||||| || || || |||| Sbjct 161205 ACTTCATGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGACGGCGTCGAAGA 161146 Query 130257 GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGC 130316 | | || | || || |||||||| | || ||||| || || || ||| Sbjct 161145 GGTACTCGCGCTGCACGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGG 161086 Query 130317 CATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 130375 |||| | | ||| || | ||| | ||||||| |||| || ||| || Sbjct 161085 AGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGCTTGG 161027 Query 130376 ACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAA 130435 ||||| | | || | | || ||||| || || ||||||||| |||| || Sbjct 161026 ACCTCGTTCGAGAACCGCTCAACGAGGTTCTCGTTGACGATACCATCGGACGCAGCGAAG 160967 Query 130436 AACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAG---GGTCTTCCAGTCG 130492 || || |||| | ||||| | |||| || ||||| || ||| |||||||| Sbjct 160966 AAGGCGAGGACGTGGGAGATGAAGTGACGTTCGTTGTCGTTGAGCTTGGTGTTCCAGTCA 160907 Query 130493 TCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 | | ||||| || || || | ||||||||| ||||| Sbjct 160906 ACCATGTCCTTGGACAGGTCCATCTCCTCCGCTGTCCA 160869 Score = 93.3 bits (102), Expect = 5e-14 Identities = 149/211 (71%), Gaps = 6/211 (3%) Strand=Plus/Plus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||| || || || || || ||||| || || ||||| || || |||||| Sbjct 159171 CCCTCGTCCCGACTTATCAGCTCGTTGGAGAATGTTAGCCCGGGCATCAGCCCACGCTTC 159230 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 |||| ||||||||| ||| ||||| |||||||| || ||||| || |||||| Sbjct 159231 TTCAGCCAGAAAATGCTTGCAAAGGAGCCCGAGAAGAAAATGCCCTCGACCGCGGCGAAC 159290 Query 130154 GCAAAGAGACGCTCAGCAAAGG---AGCGGGACTTTGTATCAAACCACTTCATCGCCCAC 130210 || | || ||||| || || | |||| | | | | | | |||| | |||||| Sbjct 159291 GCTACCAGTCGCTCCGCGAACGTCGAGCGCG-CGTCGGAG--ATCCACCGGAGGGCCCAC 159347 Query 130211 TGCGCCTTTTTCTCGATACACGGGACGGTCT 130241 | |||||| |||| ||||||||||| ||||| Sbjct 159348 TCCGCCTTCTTCTTGATACACGGGATGGTCT 159378 >seq362 Length=48712 Score = 161 bits (178), Expect = 1e-34 Identities = 465/706 (66%), Gaps = 26/706 (4%) Strand=Plus/Plus Query 129838 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGAT 129897 ||| || || |||| || | ||| ||||||| |||| || |||||||| ||||| Sbjct 45765 GAGCAGGCGGTCCGCGAAGAACTTGATGTACTGGCACATGAGGTCCGAGTTCATGCCGAT 45824 Query 129898 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCAC 129957 ||| ||||| |||||| | ||| || |||| ||| ||||||| | || || ||| | Sbjct 45825 GAGCTTACACGGGAGCACTTCCGTGAGGAACTCCTGCTCAATGGCGACGGCGTCCGTGAT 45884 Query 129958 GATGGCGTGAATGGTCTCCG--TGCCAGGTCTATTGCGCAAAGTCT-TGAAGAGTTCCAC 130014 |||| | | | ||| || | ||| | | || | | || ||||||| || Sbjct 45885 GATGCGGCGGACGGTGTCGGGATGCGCGCGGT---GCTCGAGGTGGCTGAAGAG---CAG 45938 Query 130015 G---GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAG 130071 | ||||| || ||| | |||||||| ||| |||||| || | |||||| || Sbjct 45939 GCATGCAAAGTCGGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGGTGGAGAAGGTGAG 45998 Query 130072 ACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAA 130131 || ||||||||||| || ||||| | |||||| |||| || ||||| ||||| || Sbjct 45999 GCCGGGCATGAGACCGCGTTTCTTGAGCCAGAAGATCGATGCGAAGGAGCCCGAGAAAAA 46058 Query 130132 GATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC 130191 ||| |||| || | || || | ||| |||||||| |||| |||||| ||| Sbjct 46059 GATGCCCTTGACGGTGACAAAGGCGACGAGGCGCTCAGCGAAGG---TGGACTTGTCATC 46115 Query 130192 ---AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248 | ||||||||| ||||| | ||||| |||| ||| ||||||| ||||| || || Sbjct 46116 TGAGATCCACTTCATGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGACGGC 46175 Query 130249 TTCAAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 130308 || ||||| | || | || || || ||||||| |||| ||||| || || Sbjct 46176 GTCGAAGAGGTACTCGCGCTGTGCGGGGTCCGTGATGTAGGTATCAATGAG---GGAGTA 46232 Query 130309 TGTTTCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGC 130367 || ||| || | | | ||| |||| ||| | ||||||| |||| || ||| Sbjct 46233 GGTCTCGGAGTGAATGGTGTCCATCATGG-TCTGGAAGCCGTAGAAGCAGCGGGCCTCGG 46291 Query 130368 TTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACC 130427 || ||||| | | || | | || ||||| || || | ||| ||| Sbjct 46292 CGGCTTGGACCTCGTTCGAGAACCGCTCAACGAGGTTCTCGTTGACGATGCTATCCGACG 46351 Query 130428 CAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTT---CAGGGTCT 130484 |||| || || || |||| | ||||| | |||| || ||||| | |||| | Sbjct 46352 CAGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGACGTTCGTTGTCGTTGAGCTGGGTGT 46411 Query 130485 TCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||||| | | ||||| || || || | || |||||| ||||| Sbjct 46412 TCCAGTCGACCATGTCCTTGGACAGGTCCATCTTCTCCGCTGTCCA 46457 >seq92 Length=307622 Score = 104 bits (114), Expect = 3e-17 Identities = 150/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 119350 TGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCG 119409 |||| || ||||||| || || || ||| | || | ||||||||||||||||||| Sbjct 59710 TGAGCGTGTCGTAGATGCCTTCAATGCTGTCGTCTTTCATGGCGATGAGGAAGCAGCTCG 59651 Query 119410 ACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATAC 119469 ||||||| || ||||| || ||||||||||| || || | ||||| |||| || Sbjct 59650 ACATTTGCGGGTGCGGTGTGCCGGCGTTGAAGAGCGTGGGGGATGCGTGCGTGAAGTAAC 59591 Query 119470 CTTGGGACATCTTGTCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCG 119528 || |||||| ||| ||| ||||| | |||| || | | ||| ||||| ||||| Sbjct 59590 GTTCAGACATCATGTTGTACGTCTCGAGGACGTGCTCG-AGGTCAGAACCGTGGATACCA 59532 Query 119529 ATCGAGACCCGCATAAACATGTATTGGGG 119557 | | ||||||||| | || || ||| || Sbjct 59531 ACGGCGACCCGCATGAGCAAGTGTTGCGG 59503 >seq128 Length=238353 Score = 86.0 bits (94), Expect = 8e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 179956 TTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACT 180015 || || || |||||||| || ||| ||| |||||| || || || ||||||||||| Sbjct 144407 TTACCGCGCAGAGGGAAGACTCCGAAGTTATCACGCCCGACTACGCCTAGACCAGCAACA 144348 Query 180016 GCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCC 180075 || |||| ||| || || || || ||||| | || || || || | || || | Sbjct 144347 GCTAGGGCCTTTGCTGAGTCTCCTTCCGTTAGAATCAGGGTGCAGTCCTTAGCATGCTTC 144288 Query 180076 GTCCCTGCCTTGTTCGCGTCGTCCAACTTGGG 180107 |||||||| |||||||| ||| |||| ||||| Sbjct 144287 GTCCCTGCATTGTTCGCATCGGCCAATTTGGG 144256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618420403937840