Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq173 136 5e-27 seq362 118 1e-21 seq144 98.7 1e-15 >seq173 Length=183199 Score = 136 bits (150), Expect = 5e-27 Identities = 180/246 (73%), Gaps = 8/246 (3%) Strand=Plus/Plus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| || ||| || | || | || || || | ||||| || || ||||| |||||| Sbjct 161145 CTCTTCGACGCCGTCGAGACCATCCCTTGCATCAAGAAGAAGGCCGACTGGGCCATGAAG 161204 Query 94774 TGGTTT---GATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 94830 ||| | ||| ||||| |||| ||||| || ||| |||| ||||| || Sbjct 161205 TGGATCTCAGATGACAAGTCCA---CCTTCGCTGAACGCCTCGTCGCCTTTGCCGCCGTC 161261 Query 94831 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCT 94889 ||||| ||||||||||| || ||||| |||| | || | |||||||||||||| ||||| Sbjct 161262 GAGGGCATCTTCTTCTCGGGCTCCTT-TGCGTCCATCTTCTGGCTCAAGAAGCGCGGTCT 161320 Query 94890 CATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGA 94949 |||||| || ||| ||||||||||||||| ||| || |||||||| | ||| || Sbjct 161321 CATGCCCGGCCTCACCTTCTCCAACGAGCTCATCAGCCGCGACGAGGGGATGCACACCGA 161380 Query 94950 GTTTGC 94955 ||||| Sbjct 161381 CTTTGC 161386 Score = 82.4 bits (90), Expect = 9e-11 Identities = 145/205 (71%), Gaps = 10/205 (5%) Strand=Plus/Minus Query 94738 CCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCC 94797 |||||||| | ||||| ||||| ||||| | |||| | | | | | |||| || Sbjct 159370 CCGTGTATCAAGAAGAAGGCGGAGTGGGCCCTCCGGTGGATC--TCCGACG-CGCGCTCG 159314 Query 94798 ---TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 || || |||||||| | || || || || ||||| || |||||||| || ||| Sbjct 159313 ACGTTCGCGGAGCGACTGGTAGCGTTCGCCGCGGTCGAGGGCATTTTCTTCTCGGGCTCC 159254 Query 94855 TTCTGC--GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912 || ||| || |||| ||||| |||||||| || || ||||| || || ||||||| Sbjct 159253 TT-TGCAAGC-ATTTTCTGGCTGAAGAAGCGTGGGCTGATGCCCGGGCTAACATTCTCCA 159196 Query 94913 ACGAGCTTATCTCTCGTGACGAGGG 94937 ||||||| || ||| |||||||| Sbjct 159195 ACGAGCTGATAAGTCGGGACGAGGG 159171 >seq362 Length=48712 Score = 118 bits (130), Expect = 1e-21 Identities = 174/245 (71%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| || ||| || | || | ||||| || | ||||| || || ||||| |||||| Sbjct 46184 CTCTTCGACGCCGTCGAGACCATCCCGTGCATCAAGAAGAAGGCCGACTGGGCCATGAAG 46125 Query 94774 TGGTTT---GATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 94830 ||| | ||| ||||| |||| |||||||| ||| |||| |||| || Sbjct 46124 TGGATCTCAGATGACAAGTCCA---CCTTCGCTGAGCGCCTCGTCGCCTTTGTCACCGTC 46068 Query 94831 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTC 94890 |||| ||||| ||||| || |||||| | || | ||||||||||| || |||||| Sbjct 46067 AAGGGCATCTTTTTCTCGGGCTCCTTCGCATCGATCTTCTGGCTCAAGAAACGCGGTCTC 46008 Query 94891 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAG 94950 ||||| || ||| |||||||| |||||| ||| || |||||||| | ||| || Sbjct 46007 ATGCCCGGCCTCACCTTCTCCACCGAGCTCATCAGCCGCGACGAGGGGATGCACACCGAC 45948 Query 94951 TTTGC 94955 ||||| Sbjct 45947 TTTGC 45943 >seq144 Length=208183 Score = 98.7 bits (108), Expect = 1e-15 Identities = 109/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 |||| |||||||| ||| || | ||||| || |||| ||||||||||| || |||| Sbjct 50503 CCTTCGCTGAGCGCCTCGTCACCTTTGCCGCCGTCGAGGTCATCTTCTTCTCGGGCTCCT 50562 Query 94856 TCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 || ||| | || | ||||| |||||||| |||||||||| || ||| ||||||||| Sbjct 50563 TC-GCGTCCATCTTCTGGCTGAAGAAGCGCGGTCTCATGCACGGCCTCAATTTCTCCAAC 50621 Query 94915 GAGCTTATCTCTCGTGACGAGGG 94937 ||| | ||| | | |||||||| Sbjct 50622 GAGATCATCGCCCACGACGAGGG 50644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583246845485360