Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq174 141 3e-28 seq114 118 3e-21 seq258 91.5 4e-13 seq45 89.7 2e-12 >seq174 Length=181799 Score = 141 bits (156), Expect = 3e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || ||||| ||||| || || ||||| || || Sbjct 45304 CATACCACCACGCAGACGAAGGACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTC 45363 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || || ||||||||||| ||||| || || ||||| Sbjct 45364 GGAAAGCGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGG 45423 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || ||||||||||| || || || || || || || | || || | ||| Sbjct 45424 AGGGATGCCCTCCTTATCCTGAATCTTTGCCTTGACGTTGTCGATGGTGTCGGAGGATTC 45483 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || |||| ||||| || || || || || || || || ||||| Sbjct 45484 AACCTCGAGGGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 45534 Score = 140 bits (154), Expect = 1e-27 Identities = 157/209 (75%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| |||||||| || || ||||| || || ||||| || | || || ||||| || | Sbjct 44872 CAAG-TGAAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTCCGGCCATCCTCGA 44930 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || || || ||||| ||||| ||||| || ||||| || || || |||||||| | Sbjct 44931 GCTGCTTCCCTGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGA 44990 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || || || ||||||| || || | || || ||||| || | ||||||| Sbjct 44991 TCTTCGCCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCAAGGGTGATGGTCTTTC 45050 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | ||||| || || || |||||||||||| Sbjct 45051 CCGTTAGGGTCTTAACGAAAATCTGCATT 45079 >seq114 Length=262464 Score = 118 bits (130), Expect = 3e-21 Identities = 167/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||| ||||| | | || || ||||| ||||||||||| || || || || | Sbjct 228699 TTTGCATACCTCCACGGAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGT 228758 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || || || || || || || || || ||||| || || || || | Sbjct 228759 AGTCCGAGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGT 228818 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || || || || || |||||||| || || || || || || || || | || || | Sbjct 228819 CGGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATAGTGTCCGACG 228878 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || ||||| || | ||||| ||||| || || || ||||| |||||||| Sbjct 228879 ACTCGACCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 228933 >seq258 Length=101253 Score = 91.5 bits (100), Expect = 4e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 349231 TTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAG 349290 |||||| | ||| ||||||||||||||||| || || || || || ||||| |||||||| Sbjct 73573 TTGTGTCGGTGTCTGGCAAAATGATCGTGTTGAGATCATCGCCAACGATCAGGGTAACAG 73514 Query 349291 AACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAA 349350 |||||| || || || || | || ||| | |||||| | || |||||| ||| || Sbjct 73513 AACAACACCCTCTTATGTCTCGTTCTCCGCCAACGAGCGTCTCATCGGTGATGTTGCCAA 73454 Query 349351 AAATCAAG 349358 || |||| Sbjct 73453 GAACCAAG 73446 >seq45 Length=458687 Score = 89.7 bits (98), Expect = 2e-12 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 349232 TGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGA 349291 ||||| | ||| ||||||||||||||||| || || || || || || || |||||| || Sbjct 222930 TGTGTCGGTGTCTGGCAAAATGATCGTGTTGAGATCATCGCCAACGACCAGGGTAACCGA 222871 Query 349292 ACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAA 349351 ||||| || || ||||| | || |||| | ||||||| | || || ||| | || || Sbjct 222870 ACAACACCCTCTTACGTCTCGTTCTCCGACAATGAGCGTCTCATCGGCGATGCCGCCAAG 222811 Query 349352 AATCAAG 349358 || |||| Sbjct 222810 AACCAAG 222804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515217241226942