Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq92 129 6e-25 seq173 111 2e-19 >seq92 Length=307622 Score = 129 bits (142), Expect = 6e-25 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| |||||| | |||||||||||| ||| | || |||| ||||||||| Sbjct 59516 TCATGCGGGTCGCCGTTGGTATCCACGGTTCTGACCTCGAGCACGTCCTCGAGACGTACA 59575 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 || | ||| || ||||| |||||||| | || || || |||||||| || || Sbjct 59576 ACATGATGTCTGAACGTTACTTCACGCACGCATCCCCCACGCTCTTCAACGCCGGCACAC 59635 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 ||||| || ||||||||||||||||| | || ||||| || ||| || || |||| Sbjct 59636 CGCACCCGCAAATGTCGAGCTGCTTCCTCATCGCCATGAAAGACGACAGCATTGAAGGCA 59695 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCC 53398 ||||||| ||||||||| |||||| Sbjct 59696 TCTACGACACGCTCAAGAGCTGTGCC 59721 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787 |||||| ||| ||| ||| ||||||||||| | ||||||| | || ||| | | Sbjct 61185 TCAAGGCGATCTACAAGACCGTGTGGGAGATCTCGCAGAAGAAGGTCATCGACCTCGCAG 61244 Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACAT-CTTCATGGAGAATCCT 55846 | || ||||| || | |||| |||||| ||||| || ||||| | || || || || Sbjct 61245 CGGACCGTGGCGCCTTCATCTGCCAGTCGCAGTCCCTCAACATACATC-TGCAGGCGCCG 61303 Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 | ||| || ||| ||||| || ||||| ||||||||||| |||||||| || Sbjct 61304 ACCATGGGGCAGCTGACGAGCATGCATTTCTACGGCTGGAAGAAGGGTCTCAAGACAGGC 61363 Query 55907 ATGTACTATCTGCGGACC 55924 |||||||| ||||| ||| Sbjct 61364 ATGTACTACCTGCGCACC 61381 >seq173 Length=183199 Score = 111 bits (122), Expect = 2e-19 Identities = 335/511 (66%), Gaps = 20/511 (4%) Strand=Plus/Minus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 || || || | ||| || | || || || || | ||||| ||||| || || |||||| Sbjct 161368 CCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCGCGCTTC 161309 Query 74829 TTCAACCAAAAGATGG-CACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 || | ||| ||||||| | || ||||| || |||||||||||| ||||| ||||| Sbjct 161308 TTGAGCCAGAAGATGGACGCA-AAGGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCAAA 161250 Query 74888 GGCGACAAGGCGTTGCGCGAACGGTG-------CATCGGAAGTCATCCAAGTCTGAGCCC 74940 |||||| ||||||| ||||| |||| |||| || ||||| || |||| Sbjct 161249 GGCGACGAGGCGTTCAGCGAA-GGTGGACTTGTCATCTGA---GATCCACTTCATGGCCC 161194 Query 74941 ATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGG--CTTGCCTT 74998 | || || || |||| ||||| || |||| || | ||||||| || || Sbjct 161193 AGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGACGGCGTCGAAGAGGTACTCGC--G 161136 Query 74999 CTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGA 75058 || |||| ||||||| | |||| || | || ||||| ||||| || || || Sbjct 161135 CTGCACGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGTGGATGTT 161076 Query 75059 CTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGA 75118 ||| | | |||| | ||||||| | || ||||| || || || || || || Sbjct 161075 CTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGCTTGGACCTCGTTCGA 161016 Query 75119 AAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTAC 75178 || | ||| ||||| ||||||| || || || || ||||| || || || || Sbjct 161015 GAACCGCTCAACGAGGTTCTCGTTGACGATACCATCGGACGCAGCGAAGAAGGCGAGGAC 160956 Query 75179 CATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTT---TGTCCCAATCCTTCAGGTCCCC 75235 ||| ||||| || || | ||| |||| | ||| ||| || || |||| Sbjct 160955 GTGGGAGATGAAGTGACGTTCGTTGTCGTTGAGCTTGGTGTTCCAGTCAACCATGTCCTT 160896 Query 75236 CGCCAAATCAATCTCCTCGACCGTCCAGAAA 75266 | || || |||||||| | ||||||||| Sbjct 160895 GGACAGGTCCATCTCCTCCGCTGTCCAGAAA 160865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547202907857200