Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq174 199 5e-46 seq114 152 6e-32 seq12 113 5e-20 seq92 102 9e-17 seq41 98.7 1e-15 seq173 95.1 1e-14 seq4 91.5 2e-13 seq49 86.0 7e-12 >seq174 Length=181799 Score = 199 bits (220), Expect = 5e-46 Identities = 181/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||||||||| |||||||| || ||||| ||||| |||||| Sbjct 45306 ATGCAGATCTTTGTCAAGACGCTTACTGGCAAGACCATCACTCTCGAGGTCGAGTCATCC 45247 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||||| || ||||||||||||||||| || ||||| ||||| Sbjct 45246 GACACCATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAA 45187 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || || || |||||||||| ||| || || | || || || Sbjct 45186 CAGCGTCTTATCTTTGCCGGCAAACAGCTCGAGGATGGTCGCACGCTCTCGGATTACAAC 45127 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| || || |||||||| ||||| ||| ||||||| || || ||| Sbjct 45126 ATCCAGAAAGAGTCCACTCTGCATCTCGTCCTGCGTCTCCGTGGAGGA 45079 Score = 188 bits (208), Expect = 8e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || |||||||| ||||| || |||||||| || Sbjct 45534 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACCATTACCCTCGAGGTTGAATCCTCC 45475 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || |||||||| |||||||| || ||||| ||||| Sbjct 45474 GACACCATCGACAACGTCAAGGCAAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAA 45415 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| ||||| |||||||||| || || || | ||||| ||| Sbjct 45414 CAGCGTCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACGCTTTCCGACTACAAT 45355 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || || ||| | ||||| || ||||| Sbjct 45354 ATCCAGAAGGAGTCCACTCTCCACCTCGTCCTTCGTCTGCGTGGTGG 45308 Score = 156 bits (172), Expect = 5e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || ||||| || || || ||||| || || |||||||| ||||| Sbjct 45079 AATGCAGATTTTCGTTAAGACCCTAACGGGAAAGACCATCACCCTTGAGGTCGAGTCGTC 45020 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| || | ||||| || || ||||| |||||||| || ||||| ||||| Sbjct 45019 GGACACGATTGACAACGTCAAGGCGAAGATCCAGGATAAGGAGGGTATCCCTCCCGACCA 44960 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || || || || ||||| |||||||||| || ||||| | || || || Sbjct 44959 GCAGCGTCTTATCTTCGCAGGGAAGCAGCTCGAGGATGGCCGGACCCTCTCGGATTACAA 44900 Query 27585 TGTCCAAAAGGAATCCACTCTTCA 27608 |||||||||||||||||||||| Sbjct 44899 CATCCAAAAGGAATCCACTCTTCA 44876 Score = 134 bits (148), Expect = 2e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| |||||||| || || |||||||| || || || ||||| ||||| Sbjct 45816 AATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTCGAGTCTTC 45757 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | || | || | ||||| || || |||||||||||||| |||||||| || || Sbjct 45756 GGACACGATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCCGATCA 45697 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||| || || || || || ||||| || ||||||| || || || | ||||| || Sbjct 45696 ACAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAA 45637 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCT 27611 |||| ||||| || || || ||||| Sbjct 45636 CATCCAGAAGGAGTCGACGCTGCATCT 45610 >seq114 Length=262464 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || ||||||||||| || || |||||||| ||||| Sbjct 228933 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACGCTTGAGGTCGAGTCGTCG 228874 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| || || ||||| |||||||| || || || ||||| Sbjct 228873 GACACTATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAA 228814 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| || ||||| | || ||||| | ||||| || Sbjct 228813 CAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCTCGGACTACAAC 228754 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || ||||| ||||| ||| | ||||| || || || Sbjct 228753 ATCCAGAAGGAGTCTACTCTCCATCTCGTCCTCCGTCTCCGTGGAGG 228707 Score = 145 bits (160), Expect = 9e-30 Identities = 168/223 (75%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||||||||| || || || ||||| ||||| | Sbjct 228705 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCGTCT 228646 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || |||||||||||||| || || || |||||| Sbjct 228645 GACACCATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 228586 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || || || ||||| |||||||| | || || || ||| ||||| || Sbjct 228585 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGGCGCACGCTGAGC-GACTACAA 228527 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 | || ||||| ||| || || || | |||||||| || Sbjct 228526 CATTCAGAAGGAGAGCACGCTCCACCT--TGGTGCGTCTTGGC 228486 Score = 89.7 bits (98), Expect = 6e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || || ||||||||||||||| | || || || || ||||| |||||||| | || ||| Sbjct 229056 ATCCCCCCAGACCAGCAGCGTTTGATCTTCGCCGGGAAGCAGCTCGAGGACGGGCGCACC 228997 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGT 27630 || | ||||| || |||| ||||| ||||| || ||||| ||| | ||||| || || Sbjct 228996 CTGTCCGACTACAACATCCAGAAGGAGTCCACCCTCCATCTCGTCCTCCGTCTCCGTGGA 228937 Query 27631 GG 27632 || Sbjct 228936 GG 228935 >seq12 Length=673443 Score = 113 bits (124), Expect = 5e-20 Identities = 165/228 (72%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | ||||||||||| || | || ||| | ||||| Sbjct 358680 ATGCAGATCTTCGTCAAGACA-TCACCGGCAAGACGATCATGCTCGAGATCGAGTCTTCG 358738 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAAT-TCCTCCAGACCA 27524 || | ||| | |||| ||||| || || |||| |||| || || || ||| | ||| Sbjct 358739 GACACCATCGACAATTC-AAGGCGAAGATCCAGGGTAAGGCGGAGATCTCGTCC-GCCCA 358796 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| || || ||||| || ||||| ||||||||||| | || || | | ||| || Sbjct 358797 ATAGCGCCTCATCTTTGCCGGAAAGCAGCTCGAGGATGAGTGCACGCTCTCGGGCTACAA 358856 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| ||||| ||| ||| ||| || || || Sbjct 358857 CATCCAGAAGGAGTCCACTCTCCATCTCGTCCTGCATCTCCGTGGCGG 358904 Score = 111 bits (122), Expect = 2e-19 Identities = 159/219 (73%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | ||||||||||| || | || ||| | ||||| Sbjct 355242 ATGCAGATCTTCGTCAAGACA-TCACCGGCAAGACGATCATGCTCGAGATCGAGTCTTCG 355300 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAAT-TCCTCCAGACCA 27524 || | ||| | |||| ||||| || || |||| |||| || || || ||| | ||| Sbjct 355301 GACACCATCGACAATTC-AAGGCGAAGATCCAGGGTAAGGCGGAGATCTCGTCC-GCCCA 355358 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| || || ||||| || ||||| ||||||||||| | || || | | ||| || Sbjct 355359 ATAGCGCCTCATCTTTGCCGGAAAGCAGCTCGAGGATGAGTGCACGCTCTCGGGCTACAA 355418 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 |||| ||||| |||||||| ||||| ||| ||| ||| Sbjct 355419 CATCCAGAAGGAGTCCACTCTCCATCTCGTCCTGCATCT 355457 >seq92 Length=307622 Score = 102 bits (112), Expect = 9e-17 Identities = 206/301 (68%), Gaps = 6/301 (2%) Strand=Plus/Minus Query 80715 CATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA 80774 |||||| |||| |||||||| || || || | |||| || | ||| ||| |||| || Sbjct 60697 CATGAAAGCGTCGGCCAGGCCTTGGACACCCAGACCGATAGGTCTGTGACGCATGTTGGA 60638 Query 80775 -TCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTG 80833 | || | || ||| | ||||| |||| ||| |||| |||||||| |||| | Sbjct 60637 GTTGCGTGAT-TCGGGAGTGGGGTAGTAGTTTGCATCAATGATGCGGTTCAAGTTGAACG 60579 Query 80834 TAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCC--CTTCACAAA 80891 || ||| || || |||| | |||| |||||| || ||||| || | || Sbjct 60578 CAAGGACCTTTGAGACCGCATGCAACTTCTTGAAGTCGTAT--GTTCCATTCTGAATGAA 60521 Query 80892 TGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTC 80951 | || ||| | ||| | |||||||||||||| ||| || | | | | |||| Sbjct 60520 GGATGGGAGGGAGATCGACCCAAGATTGCACACGGCGGTCTCATCGGGAGCGGAGTACTC 60461 Query 80952 GACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTT 81011 || ||| ||||||||||| || || || || ||||| || ||||| |||||||| || || Sbjct 60460 GATGATCTCCGTGCACAAGTTCGACGATTTGATTGTTCCGAGGTTCTTCTGGTTGGATTT 60401 Query 81012 G 81012 | Sbjct 60400 G 60400 Score = 89.7 bits (98), Expect = 6e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || ||||| ||||||||||| |||||||| ||||||||||||||||| | ||||| Sbjct 61380 GTGCGCAGGTAGTACATGCCTGTCTTGAGACCCTTCTTCCAGCCGTAGAAATGCATGCTC 61321 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAG-ATGTTCAGAGACTGAGACTGACAGAT 80156 | |||| | | | || || || || || | ||||| || ||||| ||||| ||||| Sbjct 61320 GTCAGCTGCCCCATGGTCGGCGCCTGCA-GATGTATGTTGAGGGACTGCGACTGGCAGAT 61262 Query 80157 GAAAGCCCCACGATCTGCCGC 80177 ||| || ||||| || || || Sbjct 61261 GAAGGCGCCACGGTCCGCTGC 61241 >seq41 Length=470795 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 |||||||| |||||||||||||| || || || || ||||| ||||| |||| ||| ||| Sbjct 242775 ATTCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAAGATGGTCGCACC 242716 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGT 27630 || | ||||| || |||| ||||| ||||| || || || || | ||||| || ||| Sbjct 242715 CTCTCCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGTCTGCGTGGT 242656 Query 27631 GG 27632 || Sbjct 242655 GG 242654 >seq173 Length=183199 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/190 (72%), Gaps = 5/190 (3%) Strand=Plus/Minus Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT----GAATCGTGGGTCGTCGTTTGGTCAGCG 64718 || ||||| || |||||| |||||||||| || || | ||| |||| | |||| Sbjct 159358 AAGAAGGCGGAGTGGGCCCTCCGGTGGATCTCCGACGCGCGC-TCGACGTTCGCGGAGCG 159300 Query 64719 TCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTT 64778 || | ||| || ||| || || || |||||||| || || || || ||||| Sbjct 159299 ACTGGTAGCGTTCGCCGCGGTCGAGGGCATTTTCTTCTCGGGCTCCTTTGCAAGCATTTT 159240 Query 64779 CTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCG 64838 |||||| || ||||| || |||||||| || || | || || ||||||||||| ||| Sbjct 159239 CTGGCTGAAGAAGCGTGGGCTGATGCCCGGGCTAACATTCTCCAACGAGCTGATAAGTCG 159180 Query 64839 GGACGAGGGG 64848 |||||||||| Sbjct 159179 GGACGAGGGG 159170 Score = 82.4 bits (90), Expect = 9e-11 Identities = 125/176 (71%), Gaps = 4/176 (2%) Strand=Plus/Plus Query 64717 CGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATT 64776 || |||| || |||||| || || || || ||||| || || || || || || Sbjct 161238 CGCCTCGTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCCTTTGCGTCCATC 161297 Query 64777 TTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCT 64836 |||||||| || ||||| || || ||||| || || | || || |||||||| ||| Sbjct 161298 TTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCAGC 161357 Query 64837 CGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCAGCCACCTCAAG 64890 || ||||||||| | ||| || ||||| | || || ||||||||||||||| Sbjct 161358 CGCGACGAGGGGATGCACACCGACTTTGCA--TGCCTGCTCTTCAGCCACCTCAAG 161411 >seq4 Length=859135 Score = 91.5 bits (100), Expect = 2e-13 Identities = 102/135 (76%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGG-CAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||| ||||| |||||||| || ||| | |||||| | || |||||||| ||||| Sbjct 830304 ATGCAGATCTTCGTCAAGACTCTCACCCGACAAGACAGTCACGCTTGAGGTCGAGTCCTC 830363 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | ||| | || || || || |||||||||||||| ||||| || ||||| Sbjct 830364 GGACACCATCGACAATGTCAAAGCGAAGATCCAGGACAAGGAGGGCATTCCGCCCGACCA 830423 Query 27525 GCAGCGTCTAATTTT 27539 ||||| || || || Sbjct 830424 ACAGCGCCTCATCTT 830438 >seq49 Length=440159 Score = 86.0 bits (94), Expect = 7e-12 Identities = 77/94 (82%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || || || |||||||||||||| || |||||||| ||||| |||||||||| || || Sbjct 335969 ATCCCACCCGACCAGCAGCGTCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACA 335910 Query 27571 CT-AGCAGACTATAATGTCCAAAAGGAATCCACT 27603 || ||| ||||| || |||||||||| |||||| Sbjct 335909 CTGAGC-GACTACAACATCCAAAAGGAGTCCACT 335877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570296755323680