Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq92 109 4e-19 >seq92 Length=307622 Score = 109 bits (120), Expect = 4e-19 Identities = 166/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 30185 TGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTGTACTCTGCTCC 30243 |||| ||||||||| ||| |||| ||||| ||| || |||| |||||||||| || Sbjct 266765 TGCAACTGATCCACGCCCTTCCCGTCGTAGT-TGCTATCGCAGTCCTTGTACTCTGCGCC 266707 Query 30244 GAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 30303 ||||||||||||||| || || ||||| ||||| ||||| || || |||||| | | Sbjct 266706 GAAATGCCTCCACTGAAATCCATACACAGGTCCGAGGTCACCTTCGCGCCTGTGACCCAG 266647 Query 30304 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30363 || | | ||||| || | ||| ||||| | ||||||||||| | ||| | Sbjct 266646 CCCTCGCGACTCCAAGAATGCCTGGGAGCCGTTCCCATCCCAGATCTTGATCCCGCGTGC 266587 Query 30364 AGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCAC 30417 ||| || || | || || || || || |||||| ||||||||||| || Sbjct 266586 AGACAGAAGCTTTGCGTCCGTCGAGCCGTGGATGAACCAGAGCAGCTCCTCGAC 266533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406300922048088