Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq174 91.5 9e-14 seq114 84.2 1e-11 >seq174 Length=181799 Score = 91.5 bits (100), Expect = 9e-14 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| || | ||| |||||| ||| || || ||||| ||||| || || || || Sbjct 45089 AGACGCAGGACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGA 45148 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || ||||| |||||||| || | |||||||||||| || || | |||||| Sbjct 45149 CCATCCTCGAGCTGTTTGCCGGCAAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCC 45208 Query 34609 TTGTC 34613 ||||| Sbjct 45209 TTGTC 45213 Score = 82.4 bits (90), Expect = 5e-11 Identities = 145/209 (69%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 34499 CCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAA 34558 |||| || |||||| |||||||| ||||| ||||| || || || || | || || | Sbjct 44871 CCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTCCGGCCATCCTCGA 44930 Query 34559 GTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGA 34618 | || || || || || || | |||||| ||||| || || | |||||||| || || Sbjct 44931 GCTGCTTCCCTGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGA 44990 Query 34619 TCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677 |||| | || ||| | ||| ||||| ||| || || | ||| || || || Sbjct 44991 TCTTC-GCCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCAAGGGTGATGGTCTTT 45049 Query 34678 CCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || |||| || || || ||||||||||| Sbjct 45050 CCCGTTAGGGTCTTAACGAAAATCTGCAT 45078 >seq114 Length=262464 Score = 84.2 bits (92), Expect = 1e-11 Identities = 100/135 (74%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 34488 AAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCG 34547 |||||||| || | ||||| ||||||||||| |||||||| || || || || || Sbjct 228489 AAGACGCACCA--AGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCG 228546 Query 34548 CTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTC 34607 | |||| || || || || ||||| || || | ||||| ||||| || || | ||||| Sbjct 228547 CCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTC 228606 Query 34608 CTTGTCTGTGATCTT 34622 |||||| |||||| Sbjct 228607 CTTGTCCTGGATCTT 228621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314722258341962