Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq174 105 5e-18 >seq174 Length=181799 Score = 105 bits (116), Expect = 5e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || ||||||||||| || |||||||| ||||| || || || | Sbjct 45816 AATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTCGAGTCTTC 45757 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || | | || || || ||||| || || | || || ||||| Sbjct 45756 GGACACGATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCCGATCA 45697 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || |||||||| || || || || | |||||| | ||| ||||| Sbjct 45696 ACAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAA 45637 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 45636 CATCCAGAAGGAGTCGAC 45619 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || || || || || || ||||||||||| || || || | Sbjct 45306 ATGCAGATCTTTGTCAAGACGCTTACTGGCAAGACCATCACTCTCGAGGTCGAGTCATCC 45247 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| ||||| || || | || || || ||| Sbjct 45246 GACACCATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAA 45187 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || |||||||||||||| || || || | ||||| | ||||||||| Sbjct 45186 CAGCGTCTTATCTTTGCCGGCAAACAGCTCGAGGATGGTCGCACGCTCTCGGATTACAAC 45127 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||||||||| Sbjct 45126 ATCCAGAAAGAGTCCAC 45110 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||||||||| ||||| |||||||| || ||||| || || || || || | Sbjct 45079 AATGCAGATTTTCGTTAAGACCCTAACGGGAAAGACCATCACCCTTGAGGTCGAGTCGTC 45020 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| | | || || || || || || ||| | || || || || Sbjct 45019 GGACACGATTGACAACGTCAAGGCGAAGATCCAGGATAAGGAGGGTATCCCTCCCGACCA 44960 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || || || || || || || | || || | |||||||| Sbjct 44959 GCAGCGTCTTATCTTCGCAGGGAAGCAGCTCGAGGATGGCCGGACCCTCTCGGATTACAA 44900 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| ||||| || ||||| Sbjct 44899 CATCCAAAAGGAATCCAC 44882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338001715292312