Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq174 152 1e-31 seq114 127 5e-24 seq12 100 7e-16 seq4 91.5 4e-13 >seq174 Length=181799 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||||||||| || || |||| |||||| |||| | || | ||||| Sbjct 45323 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGGAAAGCGTGCGTCCATCC 45382 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || || |||||||| || || || || ||||| || Sbjct 45383 TCGAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCC 45442 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || |||||| ||| || ||||||||||| |||| ||| || || | || || ||| Sbjct 45443 TGAATCTTTGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAACCTCGAGGGTAATGGTC 45502 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||| || || | ||| | |||||| Sbjct 45503 TTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 45534 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| || || |||||||| ||||| |||| |||||||| | | || Sbjct 45085 ACGGAGACGCAGGACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCCGAGAGCGT 45144 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || ||||| || || || |||||||| || ||||||||||| || || || Sbjct 45145 GCGACCATCCTCGAGCTGTTTGCCGGCAAAGATAAGACGCTGTTGGTCGGGAGGGATGCC 45204 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| |||||| ||||||||||| || | || || || | Sbjct 45205 CTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCGGATGACTCGACCTCGAG 45264 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| |||||||| || Sbjct 45265 AGTGATGGTCTTGCCAGT 45282 Score = 131 bits (144), Expect = 4e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| ||||||||||| ||||||| |||||||| | | || | ||||| || ||||| Sbjct 44875 GTGAAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTCCGGCCATCCTCGAGCTG 44934 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 |||||| ||||||||||| || || |||||||| || ||||| ||||| || |||||||| Sbjct 44935 CTTCCCTGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGATCTT 44994 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| || || || ||||| || | || || || | ||||| ||||| ||||| Sbjct 44995 CGCCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCAAGGGTGATGGTCTTTCCCGT 45054 Query 225690 CAAAGTTTTTATGAACACTTGCATT 225714 | || || | ||| | |||||| Sbjct 45055 TAGGGTCTTAACGAAAATCTGCATT 45079 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 |||| || || || || || || |||| ||||| |||| | ||| | ||||| || | Sbjct 45608 CAAGATGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAA 45667 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 ||||||| || |||||||| || || ||||| ||||| ||||| || |||||||| |||| Sbjct 45668 GCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCCTGGA 45727 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 |||| ||| || ||||| ||||| || | || || || | ||||||||||||| Sbjct 45728 TCTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATCGTCTTGC 45787 Query 225686 CCGTCAAAGTTTTTATGAACACTTGCATT 225714 |||| | || || | ||| | |||||| Sbjct 45788 CCGTGAGGGTCTTGACGAAGATCTGCATT 45816 >seq114 Length=262464 Score = 127 bits (140), Expect = 5e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 |||||||||| ||| || || || | ||||| ||| || || | ||| || || | Sbjct 228498 CAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGCCCGTCCTCGA 228557 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 ||||||| || |||||||| || || || |||||||| || || || |||||||| |||| Sbjct 228558 GCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGA 228617 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 |||| ||| ||| ||||||||||| || | || || || | |||||| ||||||| Sbjct 228618 TCTTCGCCTTGACATTGTCGATGGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGC 228677 Query 225686 CCGTCAAAGTTTTTATGAACACTTGCAT 225713 | || | || || | ||| | |||||| Sbjct 228678 CGGTGAGGGTCTTGACGAAGATTTGCAT 228705 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || |||||||| || || || |||| ||||| || | | || | || || Sbjct 228722 AGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 228781 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || ||||||||||| || || || ||||| || Sbjct 228782 TCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTATCC 228841 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||| ||||| || | || || || | |||||| ||| Sbjct 228842 TGGATCTTGGCCTTGACGTTGTCGATAGTGTCCGACGACTCGACCTCAAGCGTGATGGTC 228901 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 228902 TTGCCGGT 228909 >seq12 Length=673443 Score = 100 bits (110), Expect = 7e-16 Identities = 160/229 (70%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | | |||| || |||| ||||| || || |||| ||| | || | | || Sbjct 355696 ACGGAGACGCGGGACGAGATGGAAGGTGGACTCCTTCTGGATGTTGCAGTCCGAGAGCGT 355637 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT--- 225608 | ||||| || ||||||||||| || ||||| || || ||||||||||||| || Sbjct 355636 GCACCCATTCTCGAGCTGCTTCCCGGCAAAGATGAGGCGCTGTTGGTCGGGCGAGATTTC 355577 Query 225609 -ACCTT---CCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCA 225664 |||| |||| | |||||||| ||| || ||||||||||| |||| || | Sbjct 355576 CCCCTTGACGCTTGCCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCCGAGGACTCGA 355517 Query 225665 CGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 | || | | |||||||||||| || || || || | ||| | ||||| Sbjct 355516 CCTCGAGCCTGATCGTCTTGCTGGTGAATGTCTTGACGAAGATCTGCAT 355468 Score = 100 bits (110), Expect = 7e-16 Identities = 160/229 (70%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | | |||| || |||| ||||| || || |||| ||| | || | | || Sbjct 359134 ACGGAGACGCGGGACGAGATGGAAGGTGGACTCCTTCTGGATGTTGCAGTCCGAGAGCGT 359075 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT--- 225608 | ||||| || ||||||||||| || ||||| || || ||||||||||||| || Sbjct 359074 GCACCCATTCTCGAGCTGCTTCCCGGCAAAGATGAGGCGCTGTTGGTCGGGCGAGATTTC 359015 Query 225609 -ACCTT---CCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCA 225664 |||| |||| | |||||||| ||| || ||||||||||| |||| || | Sbjct 359014 CCCCTTGACGCTTGCCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCCGAGGACTCGA 358955 Query 225665 CGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 | || | | |||||||||||| || || || || | ||| | ||||| Sbjct 358954 CCTCGAGCCTGATCGTCTTGCTGGTGAATGTCTTGACGAAGATCTGCAT 358906 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/189 (70%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| || ||||||||||| || || |||| ||||| | | | || | | |||| Sbjct 355452 CAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGCCCGAGAGCGTGCACTCATC 355393 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 || |||||||| || || ||||| || || | |||| ||| || || | |||| | Sbjct 355392 CTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTATTGGGCGGACGAGATCTCCGCCTTACC 355333 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| | | ||||||||||| || | || | || | | ||||||| Sbjct 355332 CTGGATCTTCGCCTTGA-ATTGTCGATGGTGTCCGAAGACTCGATCTCGAGCATGATCGT 355274 Query 225681 CTTGCCCGT 225689 |||||| || Sbjct 355273 CTTGCCGGT 355265 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/189 (70%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| || ||||||||||| || || |||| ||||| | | | || | | |||| Sbjct 358890 CAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGCCCGAGAGCGTGCACTCATC 358831 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 || |||||||| || || ||||| || || | |||| ||| || || | |||| | Sbjct 358830 CTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTATTGGGCGGACGAGATCTCCGCCTTACC 358771 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| | | ||||||||||| || | || | || | | ||||||| Sbjct 358770 CTGGATCTTCGCCTTGA-ATTGTCGATGGTGTCCGAAGACTCGATCTCGAGCATGATCGT 358712 Query 225681 CTTGCCCGT 225689 |||||| || Sbjct 358711 CTTGCCGGT 358703 >seq4 Length=859135 Score = 91.5 bits (100), Expect = 4e-13 Identities = 103/137 (75%), Gaps = 1/137 (1%) Strand=Plus/Minus Query 225578 CGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCA 225637 ||||||| || || ||||||||||||||||| || |||||||| |||||||| || | Sbjct 830440 CGAAGATGAGGCGCTGTTGGTCGGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCTTTGA 830381 Query 225638 CAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTG-CCCGTCAAAGTT 225696 || ||||||||||| |||| || || || | ||||| |||||| | || | ||| Sbjct 830380 CATTGTCGATGGTGTCCGAGGACTCGACCTCAAGCGTGACTGTCTTGTCGGGTGAGAGTC 830321 Query 225697 TTTATGAACACTTGCAT 225713 || | ||| | ||||| Sbjct 830320 TTGACGAAGATCTGCAT 830304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192501955408316