Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq173 95.1 1e-14 >seq173 Length=183199 Score = 95.1 bits (104), Expect = 1e-14 Identities = 291/446 (65%), Gaps = 8/446 (2%) Strand=Plus/Minus Query 4563 TGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCT 4622 |||| || ||||| | ||| || || ||||| || || || | |||||||| | ||| Sbjct 161374 TGCATCCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCG 161315 Query 4623 CTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCG 4682 | ||| || ||||| || || | ||||| || || || ||||| ||||| || |||||| Sbjct 161314 CGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCCGAGAAGAAGATGCCCTCGACGGCG 161255 Query 4683 GCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTG---TCTTTAATCCATTTTAAT 4739 ||||| || || | || ||| || ||| ||| ||| ||||| || | Sbjct 161254 GCAAAGGCGACGAGGCGTTCAGCGA---AGGTGGACTTGTCATCTGAGATCCACTTCATG 161198 Query 4740 GCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTACT- 4798 ||||||| || || ||||| | ||| || || || | | |||| || | |||| Sbjct 161197 GCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGACGGCGTCGAA-GAGGTACTC 161139 Query 4799 TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTAT 4858 | | ||||| | || || ||||| || || ||| || | || || || || Sbjct 161138 GCGCTGCACGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGTGGAT 161079 Query 4859 ATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTT 4918 || || || ||||| || ||||| ||||| | || || | |||| || ||||| Sbjct 161078 GTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGCTTGGACCTCGTT 161019 Query 4919 ACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAA 4978 | || | || || | ||| ||||| || ||||| || || || || || || | Sbjct 161018 CGAGAACCGCTCAACGAGGTTCTCGTTGACGATACCATCGGACGCAGCGAAGAAGGCGAG 160959 Query 4979 AACATGAGATATAAAGTACTGTTCGT 5004 || || || || |||| |||||| Sbjct 160958 GACGTGGGAGATGAAGTGACGTTCGT 160933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427039638267362