Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq6 105 9e-18 seq173 86.0 9e-12 >seq6 Length=777208 Score = 105 bits (116), Expect = 9e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 48138 AAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 48197 |||||||||||||| ||| | || ||||||||||| || | |||||| ||||| || Sbjct 82578 AAACATGCAAAATCTGTATGCATGCCCTCATCTCTACTGATGAGTTCGTTGGAAAACGTC 82519 Query 48198 AGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAG 48257 | ||||||||| | ||| || || || ||||| |||| || |||||||| || || ||| Sbjct 82518 AAACCGGGCATCAATCCCCGCTTCTTCAGCCAGTATATGGCGGCGAAAGAGCCTGAGAAG 82459 Query 48258 AATATGCCTTCTACGGCCGCAAATGC 48283 || || || || || |||| || || Sbjct 82458 AAAATACCCTCCACCACCGCGAAAGC 82433 >seq173 Length=183199 Score = 86.0 bits (94), Expect = 9e-12 Identities = 161/236 (68%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200 || ||||| ||| ||| | || || || | ||| || | ||||| || ||||| || Sbjct 159150 CAGGCAAAGTCAGTATGCATCCCCTCGTCCCGACTTATCAGCTCGTTGGAGAATGTTAGC 159209 Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260 |||||||| || ||||| || || ||||| || || || || || || || ||||| Sbjct 159210 CCGGGCATCAGCCCACGCTTCTTCAGCCAGAAAATGCTTGCAAAGGAGCCCGAGAAGAAA 159269 Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTT---CGTTGTGT 48317 ||||| || || || || || || |||| ||| || | | | ||| | Sbjct 159270 ATGCCCTCGACCGCGGCGAACGCTACCAGTCGCTCCGCGAACGTCGAGCGCGCGTCGGAG 159329 Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGC 48373 |||||||| | ||||| || ||||||||||| | ||| || || || ||||| || Sbjct 159330 ATCCACCGGAGGGCCCACTCCGCCTTCTTCTTGATACACGGGATGGTCTCTATTGC 159385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694652180048960