Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq114 145 5e-30 seq174 141 7e-29 seq41 89.7 4e-13 seq12 87.8 1e-12 >seq114 Length=262464 Score = 145 bits (160), Expect = 5e-30 Identities = 162/213 (76%), Gaps = 5/213 (2%) Strand=Plus/Plus Query 44128 CACCA-GGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| |||| |||||||||||||| || |||||||| ||| || |||| |||| | Sbjct 228495 CACCAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGCCCGTCCT 228554 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | |||||||| ||||| ||||| | |||||||| || | || | || ||||| ||| Sbjct 228555 CGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCT 228614 Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 |||||| ||| || ||| | |||||||| | || || ||||| | ||| || || Sbjct 228615 GGATCTTCGCCTTGACATTGT--CGATGGTGTCAGACGACTCGACCTCGAGCGTGATGGT 228672 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || ||||||||||| |||||||||||||| Sbjct 228673 CTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 228705 Score = 109 bits (120), Expect = 4e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||||||||| || | ||| ||| |||| ||||||||||| ||||| || Sbjct 228742 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAA 228801 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | ||||| || || | || | || ||||| ||| ||||| ||| | | Sbjct 228802 GATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTT 228861 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || ||||| | || || ||||| | ||| || ||||| || ||||||||||| || Sbjct 228862 GTCGATAGTGTCCGACGACTCGACCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTGAC 228921 Query 44326 GAAGATTTGCATG 44338 ||||| |||||| Sbjct 228922 AAAGATCTGCATG 228934 Score = 95.1 bits (104), Expect = 9e-15 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| |||||| ||||||||||| |||| || |||| |||| || Sbjct 228953 ACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCCTCG 229012 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 |||||||||||||| ||||||||||||||||| |||| Sbjct 229013 AGCTGCTTCCCGGCGAAGATCAAACGCTGCTGGTCTG 229049 >seq174 Length=181799 Score = 141 bits (156), Expect = 7e-29 Identities = 159/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| ||||| ||||| |||| || ||| | || || Sbjct 45326 ACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGGAAAGCGTGCGTCCATCCTCG 45385 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||| | |||||| || || | ||| | || ||||| ||| Sbjct 45386 AGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCCTGA 45445 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | ||| | |||||||||| |||||| ||||| | ||||| ||||| Sbjct 45446 ATCTT-TGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAACCTCGAGGGTAATGGTCTT 45504 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| |||||||| |||||||||||||| Sbjct 45505 GCCCGTCAGGGTCTTGACGAAGATTTGCAT 45534 Score = 132 bits (146), Expect = 3e-26 Identities = 154/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 44130 CCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCA 44189 ||| |||||| ||| |||||||||||||||||||| | ||| || | || || | Sbjct 44871 CCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTCCGGCCATCCTCGA 44930 Query 44190 GCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTA 44249 |||||||||| || ||||| | ||||||||| || | ||| | ||| ||||| ||| | Sbjct 44931 GCTGCTTCCCTGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGA 44990 Query 44250 TCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTC 44309 ||||| ||| | | | || ||||| | || || ||||| | || || ||||||| Sbjct 44991 TCTTCGCCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCAAGGGTGATGGTCTTTC 45050 Query 44310 CCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| |||||||| ||||| || ||||| Sbjct 45051 CCGTTAGGGTCTTAACGAAAATCTGCAT 45078 Score = 123 bits (136), Expect = 2e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 || || ||||| |||||| ||||||||||| |||| || ||| | || || ||| Sbjct 45610 AGATGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGC 45669 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| ||||| ||||| | ||||| ||||| | ||| | || ||||| ||| ||| Sbjct 45670 TGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCCTGGATC 45729 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 ||| ||| | | | || ||||| | || || ||||| | || |||||||| ||| Sbjct 45730 TTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATCGTCTTGCCC 45789 Query 44312 GTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||| |||||||| ||||| Sbjct 45790 GTGAGGGTCTTGACGAAGATCTGCAT 45815 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | || || || || || ||| ||| || |||||||||||||| Sbjct 45076 CATTCCTCCACGGAGACGCAGGACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATC 45135 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| | || || ||||| || ||||||||||| | |||||| || || | Sbjct 45136 CGAGAGCGTGCGACCATCCTCGAGCTGTTTGCCGGCAAAGATAAGACGCTGTTGGTCGGG 45195 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | || ||||| ||| |||||| ||||| | | |||||||||| || || Sbjct 45196 AGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCGGATGACTC 45255 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || || ||||| || || || ||||| || ||||| ||||| Sbjct 45256 GACCTCGAGAGTGATGGTCTTGCCAGTAAGCGTCTTGACAAAGATCTGCAT 45306 Score = 87.8 bits (96), Expect = 1e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 44270 ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329 ||||| |||| ||| |||||||| | || || ||||||||||||||||||||||||||| Sbjct 46032 ATGGTATCGGAGGACTCCACCTCGAGGGTGATGGTCTTTCCCGTGAGGGTCTTCACGAAG 46091 Query 44330 ATTTGCATGATGTGAA 44345 |||||||| || ||| Sbjct 46092 ATTTGCATACTGAGAA 46107 >seq41 Length=470795 Score = 89.7 bits (98), Expect = 4e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| || ||| |||||| ||||||||||| |||| ||| ||| | || || Sbjct 242671 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTC 242730 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 |||||||| ||||| ||||||| ||||||||| || | ||| Sbjct 242731 GAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGG 242772 >seq12 Length=673443 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| |||||| ||||||||||| | | ||| || ||| || || Sbjct 355448 ACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGCCCGAGAGCGTGCACTCATCCTCG 355389 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||| | |||| || | || | | | |||| || Sbjct 355388 AGCTGCTTTCCGGCAAAGATGAGGCGCTATTGGGCGGACGAGATCTCCGCCTTACCCTGG 355329 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| ||| | | |||||||| | || || | ||| | | | |||||||| Sbjct 355328 ATCTTCGCCTTGAAT-TGTCGATGGTGTCCGAAGACTCGATCTCGAGCATGATCGTCTTG 355270 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || |||| ||||| |||||||| |||||| Sbjct 355269 CCGGTGA-TGTCTTGACGAAGATCTGCATG 355241 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| |||||| ||||||||||| | | ||| || ||| || || Sbjct 358886 ACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGCCCGAGAGCGTGCACTCATCCTCG 358827 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||| | |||| || | || | | | |||| || Sbjct 358826 AGCTGCTTTCCGGCAAAGATGAGGCGCTATTGGGCGGACGAGATCTCCGCCTTACCCTGG 358767 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| ||| | | |||||||| | || || | ||| | | | |||||||| Sbjct 358766 ATCTTCGCCTTGAAT-TGTCGATGGTGTCCGAAGACTCGATCTCGAGCATGATCGTCTTG 358708 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || |||| ||||| |||||||| |||||| Sbjct 358707 CCGGTGA-TGTCTTGACGAAGATCTGCATG 358679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359982002548938