Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq174 158 3e-33 seq114 127 5e-24 seq12 93.3 1e-13 seq4 91.5 4e-13 >seq174 Length=181799 Score = 158 bits (174), Expect = 3e-33 Identities = 158/205 (77%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || ||||||||||||||||| || || ||| Sbjct 45812 CAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTCGAGTCTTCGGAC 45753 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| |||||||| || || || ||||| || || || Sbjct 45752 ACGATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCCGATCAACAG 45693 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || ||||| | |||||| |||| || ||| || Sbjct 45692 CGCCTCATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATC 45633 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || |||||||||| Sbjct 45632 CAGAAGGAGTCGACGCTGCATCTTG 45608 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || || || ||||| |||||||| || || ||| Sbjct 45303 CAGATCTTTGTCAAGACGCTTACTGGCAAGACCATCACTCTCGAGGTCGAGTCATCCGAC 45244 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||||||||||| || || |||||||| ||||| || Sbjct 45243 ACCATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAACAG 45184 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| ||||| ||||||||||| ||||| | || || | ||||| ||| || Sbjct 45183 CGTCTTATCTTTGCCGGCAAACAGCTCGAGGATGGTCGCACGCTCTCGGATTACAACATC 45124 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || ||||| || || |||||||| || Sbjct 45123 CAGAAAGAGTCCACTCTGCATCTCGT 45098 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || || || || || || || ||||||||||| ||| ||| ||| Sbjct 45531 CAAATCTTCGTCAAGACCCTGACGGGCAAGACCATTACCCTCGAGGTTGAATCCTCCGAC 45472 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||||||| || || || |||||||| ||||| || Sbjct 45471 ACCATCGACAACGTCAAGGCAAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAACAG 45412 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || |||||||| |||||| | || ||| |||| || || || Sbjct 45411 CGTCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACGCTTTCCGACTACAATATC 45352 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 45351 CAGAAGGAGTCCACTCTCCACCTCGT 45326 Score = 154 bits (170), Expect = 4e-32 Identities = 158/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || ||||| || |||||||| ||||| || || ||| Sbjct 45075 CAGATTTTCGTTAAGACCCTAACGGGAAAGACCATCACCCTTGAGGTCGAGTCGTCGGAC 45016 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| ||||| ||||| || || || |||||||| |||||||| Sbjct 45015 ACGATTGACAACGTCAAGGCGAAGATCCAGGATAAGGAGGGTATCCCTCCCGACCAGCAG 44956 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || |||||||| ||||| |||| || | ||||| ||| || Sbjct 44955 CGTCTTATCTTCGCAGGGAAGCAGCTCGAGGATGGCCGGACCCTCTCGGATTACAACATC 44896 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| ||||| || || || |||| Sbjct 44895 CAAAAGGAATCCACTCTTCA-CTTG 44872 Score = 84.2 bits (92), Expect = 5e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 178024 GAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGA 178083 |||||||||| ||||| ||||| || ||||| || || ||||||||||| || ||| ||| Sbjct 45940 GAATCCCTCCCGACCAACAACGCCTGATCTTTGCGGGCAAACAGCTCGAGGACGGACGGA 45881 Query 178084 CTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | || | || || || |||| || || || || |||||||| || Sbjct 45880 CGCTGTCGGACTACAATATCCAGAAGGAGTCTACGCTGCATCTCGT 45835 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || ||||| ||||| || ||||||||||||||||| ||| || Sbjct 46096 CAAATCTTCGTGAAGACCCTCACGGGAAAGACCATCACCCTCGAGGTGGAGTCCTCCGAT 46037 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 ||||| || || ||||| ||||| || ||||| || || Sbjct 46036 ACCATTGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGG 45996 >seq114 Length=262464 Score = 127 bits (140), Expect = 5e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| || || || ||||| |||||||| || || ||| Sbjct 228702 CAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCGTCTGAC 228643 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 228642 ACCATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAG 228583 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | || || ||| || ||| | Sbjct 228582 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGGCGCACGCTGAGCGACTACAACATT 228523 Query 178104 CAAAAAGA 178111 || || || Sbjct 228522 CAGAAGGA 228515 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || || ||||| || ||||| || || ||| Sbjct 228930 CAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACGCTTGAGGTCGAGTCGTCGGAC 228871 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| ||||| || || || ||||| || ||||| || Sbjct 228870 ACTATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAACAG 228811 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| || || || | || || | || || ||| || Sbjct 228810 CGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCTCGGACTACAACATC 228751 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 228750 CAGAAGGAGTCTACTCTCCATCTCGT 228725 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/103 (79%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 ||||| || |||||||| || || ||||||||||| || |||||||| ||||| | || Sbjct 229338 ATCCCCCCCGACCAGCAGCGTCTAATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACG 229279 Query 178086 CTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 || ||||||| ||| |||| || || || || ||||| |||| Sbjct 229278 CTGTCCGATTACAACATCCAGAAGGAGTCCACCCTGCA-CTTG 229237 >seq12 Length=673443 Score = 93.3 bits (102), Expect = 1e-13 Identities = 149/213 (70%), Gaps = 7/213 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || |||| | || ||||||| |||||||| || ||| ||| Sbjct 355471 CAGATCTTCGTCAAGACATTCACCAGCAAGACGATCAGGCTCGAGGTCGAGTCCTCGGAC 355530 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAA---AGAAGG----AATCCCTCCGGA 178036 |||||||| |||||||| ||||| |||| ||| |||| |||| | || || Sbjct 355531 ACCATCGACAACGTCAAGGCGAAGATCCAGGGCAAGCGTCAAGGGGGAAATCTCGCCCGA 355590 Query 178037 CCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 ||| || || || ||||| ||||| || |||||||| |||| | || || | || | Sbjct 355591 CCAACAGCGCCTCATCTTTGCCGGGAAGCAGCTCGAGAATGGGTGCACGCTCTCGGACTG 355650 Query 178097 TAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||| |||| || || || || | ||||| || Sbjct 355651 CAACATCCAGAAGGAGTCCACCTTCCATCTCGT 355683 Score = 93.3 bits (102), Expect = 1e-13 Identities = 149/213 (70%), Gaps = 7/213 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || |||| | || ||||||| |||||||| || ||| ||| Sbjct 358909 CAGATCTTCGTCAAGACATTCACCAGCAAGACGATCAGGCTCGAGGTCGAGTCCTCGGAC 358968 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAA---AGAAGG----AATCCCTCCGGA 178036 |||||||| |||||||| ||||| |||| ||| |||| |||| | || || Sbjct 358969 ACCATCGACAACGTCAAGGCGAAGATCCAGGGCAAGCGTCAAGGGGGAAATCTCGCCCGA 359028 Query 178037 CCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 ||| || || || ||||| ||||| || |||||||| |||| | || || | || | Sbjct 359029 CCAACAGCGCCTCATCTTTGCCGGGAAGCAGCTCGAGAATGGGTGCACGCTCTCGGACTG 359088 Query 178097 TAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||| |||| || || || || | ||||| || Sbjct 359089 CAACATCCAGAAGGAGTCCACCTTCCATCTCGT 359121 Score = 84.2 bits (92), Expect = 5e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| || ||||||| ||| |||||||| || |||||| Sbjct 359362 CAAATCTTCGTCAAGACACTCACCGGCAAAACGACCACGCTCGAGGTCGAGTCTTCAGAC 359421 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||| ||| || | ||| | || || || || Sbjct 359422 ACCATCGACAATGTCAAGGCGAAGATCCAGGGCAAGGAGGAGATCTCGCCCGATCAACAG 359481 Query 178044 CGACTTATCTTCGCCG 178059 | || ||||| ||| Sbjct 359482 TGCCTCGTCTTCACCG 359497 >seq4 Length=859135 Score = 91.5 bits (100), Expect = 4e-13 Identities = 103/137 (75%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAA-ACGATCACCCTCGAGGTGGAAAGCTCAGA 177982 || || ||||| || |||||||| || || || |||| || ||||| || ||| || Sbjct 830307 CAGATCTTCGTCAAGACTCTCACCCGACAAGACAGTCACGCTTGAGGTCGAGTCCTCGGA 830366 Query 177983 CACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 ||||||||| || |||||| ||||| |||||||| || || || || || ||||| || Sbjct 830367 CACCATCGACAATGTCAAAGCGAAGATCCAGGACAAGGAGGGCATTCCGCCCGACCAACA 830426 Query 178043 ACGACTTATCTTCGCCG 178059 || || ||||||| || Sbjct 830427 GCGCCTCATCTTCGTCG 830443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203701680749316