Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03- 01] 36 sequences; 19,781,320 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq10 105 6e-18 >seq10 Length=921405 Score = 105 bits (116), Expect = 6e-18 Identities = 189/274 (69%), Gaps = 4/274 (1%) Strand=Plus/Plus Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536 ||||| || || || ||||| || || |||||||||||||| || || || || || Sbjct 131626 GCAAAGGCTCCAGGCCTCTTGTTTCCACCCTGATCGACGTATCGAGCGGTAGCGTCATAA 131685 Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACG--CCCGCCACACTCGAAC 23594 |||| | ||| || |||| ||||| ||| | || || || | | || Sbjct 131686 GCTCTCAACATGGGTACGATTCCGTTACTGTAACCG--TTCGTTCCGGCGATATAACTAC 131743 Query 23595 CTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCG 23654 | || ||||||| |||||||| || | ||| || || ||| | | || || ||||||| Sbjct 131744 CCTTGGCTCGAATGTTGTGAATGTTAAGACCGATTCCACCGGCGGTCTTGGAGATCATCG 131803 Query 23655 CGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGA 23714 | ||| |||| ||||||||||| ||||| || ||| ||||| | || ||||||| Sbjct 131804 CACATGTCTTCAAGGTGTCGTAGATTCCCTCTATCGAGTCGTCTTTCATGGCAACCAAGA 131863 Query 23715 AACACGAAGACATTTGCGCTTTGGGCGTAGCGGC 23748 | || ||||||| ||| | | || ||| |||| Sbjct 131864 AGCAAGAAGACAATTGAGGGTGAGGAGTACCGGC 131897 Score = 100 bits (110), Expect = 3e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 23335 GTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCG 23394 ||| | ||| || |||| ||| |||||||| || ||||| || |||||||||| || || Sbjct 131428 GTCCTCTTCCACTCGTCGCATGAAAAGATCGGGGATCCAGAGCGCGTAGAACAAATCACG 131487 Query 23395 GGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGC 23454 || || || || || || ||| |||||| | ||| | |||||| |||||||| || Sbjct 131488 CGCTCGGACTTCTTCCTTTCCGTGATTCTTTCGAAGATCGATAAAGTCGAACACGTCGGC 131547 Query 23455 ATGCCACGGCTCGAGGTA 23472 ||||| ||||||||||| Sbjct 131548 GTGCCAAGGCTCGAGGTA 131565 Score = 98.7 bits (108), Expect = 9e-16 Identities = 163/230 (71%), Gaps = 8/230 (3%) Strand=Plus/Plus Query 22104 TCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGC 22163 ||| ||||| || ||||| |||||||| |||||||| || | || || ||||| | Sbjct 130087 TCTGGTCCAGAGTGAACTGAATGGCGTTAACGGCCGGTCGAGTCCTCAGGTAGTACATTC 130146 Query 22164 CCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCC-ATAACTC 22222 | ||||| |||||| |||||||| ||||||| || || || ||||| | ||| || Sbjct 130147 CAGTCTTGAGACCCTTCTTCCACCCGTAAAAGTGCATGGAAGTCAACTGTCCCATGGAAG 130206 Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282 || ||| | || || || || |||||| ||| |||||||| || || |||||||| Sbjct 130207 GGTTGGTCAA-GTGAACGTTCAAGGACTGAGACTGGTCGATAAAGGCACCACGATCGGCA 130265 Query 22283 GCCATATTTATCAATGTACGCATC-GAC--ATTTCCCATACGGTCTTGTA 22329 || | | || | | | || ||| || ||||| ||||||||||| Sbjct 130266 GCGAGGTCGATGACAGC---CTTCTGACTGATCTCCCAGACGGTCTTGTA 130312 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 22457 ACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCG 22516 || || || ||||| || | |||||| || || |||||||||| ||| | || ||| Sbjct 130500 ACGACCTGGAACTCTCCAGCCAAGACACGTCGAGTGTAAATGTTGCTAGTGTAAGGCTCG 130559 Query 22517 AAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGT 22576 ||| |||| || ||||| || || | |||||||| || ||||| ||||| | || Sbjct 130560 AAACATTCGTTCCATCCCAAGATTTGGGAAGTCGAAGCTGTAGGCATGGGCGCAACGAGG 130619 Query 22577 AGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAG 22635 |||||||||| | ||||| | | || || |||||| ||||||||||| || Sbjct 130620 AGCGAGTTTCGGATTCCGTGTTCGGCGATCTTGGCCTTGAGGGAAGACCAGTCCCAGAG 130678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766199405120