Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03- 01] 36 sequences; 19,781,320 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3 105 1e-18 seq12 96.9 5e-16 >seq3 Length=1265949 Score = 105 bits (116), Expect = 1e-18 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| |||||||||||||| || || |||||||| |||||||| || || Sbjct 847060 CGTGACAACATCCAGGGAATCACCAAGCCCGCCATTCGTCGTCTCGCTCGTCGAGGAGGT 847119 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCG 16554 ||||||||| |||| |||||| |||| || |||| ||| Sbjct 847120 GTCAAGCGTATCTCGGGATTGATCTACGAGGAGACTCG 847157 >seq12 Length=840526 Score = 96.9 bits (106), Expect = 5e-16 Identities = 76/91 (84%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| |||||||||||||| |||||| | ||||| |||||||| || ||| Sbjct 59263 CGTGACAACATCCAGGGAATCACCAAGCCCGCTATCAGGCGTCTTGCTCGTCGAGGAGGA 59204 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAG 16547 ||||||||| ||||||| | |||| |||| Sbjct 59203 GTCAAGCGTATCTCTGGTCTCATCTACGAAG 59173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075167084948