Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03- 01] 36 sequences; 19,781,320 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq12 98.7 2e-15 seq10 96.9 7e-15 >seq12 Length=840526 Score = 98.7 bits (108), Expect = 2e-15 Identities = 201/295 (68%), Gaps = 14/295 (5%) Strand=Plus/Plus Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCG----CGGTATGATGTGGAGCGTTCTAT 218573 ||||||||| |||||||||| || || |||||| ||| | || | || ||||| Sbjct 726829 GACTTCATCAACAAGGAGCTGATCCTCTTCTCGATGGCGG-ACAATATC---CGATCTAT 726884 Query 218574 TCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAA 218633 || ||| ||||| || || || ||||| ||| || ||||||| || ||||| Sbjct 726885 CCCGTCAATGGCCGATGGGCTTAAACCTGGTCAGCGAAAGGTCATCTTTGCTGCTTTCAA 726944 Query 218634 GCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTC 218693 | ||| || || | ||||| |||||||| ||| | | ||||||||||| || | | Sbjct 726945 GAAGAATCTTGTCAAGGAAATCAAGGTCGCACAGCTGGCCGGTTATGTATCTGAGAAAAC 727004 Query 218694 TGGCTACCATCACGGTGAGCAGAGTCT---GCAGGGTGCCATTGTAGGCATGGCACAGGA 218750 || |||||| || || || ||||| ||| | || || || | || || | Sbjct 727005 TGCCTACCACCATGGCGAAGTCAGTCTAACTCAG---ACTATCGTCGGTCTTGCGCAAAA 727061 Query 218751 CTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCT 218805 |||||||| ||||||||||| ||| | || || | || ||||||||| || Sbjct 727062 TTATGTGGGTAGTAACAACATCAACCTCCTTGAGCCGAGTGGACAGTTTGGTACT 727116 >seq10 Length=921405 Score = 96.9 bits (106), Expect = 7e-15 Identities = 159/228 (70%), Gaps = 6/228 (3%) Strand=Plus/Plus Query 293032 GTTTTAAGACCCTTCTTCCATGCGTAGAACAGCATAGATGTCATAGACTTCAGTGTGGGA 293091 || || |||||||||||||| |||| || |||| || |||| ||| ||| | Sbjct 130149 GTCTTGAGACCCTTCTTCCACCCGTAAAAGTGCATGGAAGTCA---ACTGTCCCATGGAA 130205 Query 293092 G---TGGCCAGGAAAAGGTTCATGCTCTGCGTCTGATCGACAAAGGCACCACGATCAGCA 293148 | ||| || | || ||||| | ||| | ||| |||| ||||||||||||||| ||| Sbjct 130206 GGGTTGGTCAAGTGAACGTTCAAGGACTGAGACTGGTCGATAAAGGCACCACGATCGGCA 130265 Query 293149 GCGAGGTCAATCACTGTCTTCATAGAGATCTCCCACGATGTCTTGTACACTGCCTTGACA 293208 |||||||| || || | |||| | ||||||||| |||||||| | ||||||| Sbjct 130266 GCGAGGTCGATGACAGCCTTCTGACTGATCTCCCAGACGGTCTTGTAGATCGCCTTGAGC 130325 Query 293209 TCAGGATGAATGCCAATAACCTTCTGGATAGACCCTCCGTTGGCAATA 293256 || | | | | ||| | ||||||| || || |||| |||||| Sbjct 130326 TCGGCAGGGACACCAGGGATATTCTGGACGGATCCACCGTGAGCAATA 130373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836325910276