Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03-
01] 36 sequences; 19,781,320 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq12 86.0 8e-12
>seq12
Length=840526
Score = 86.0 bits (94), Expect = 8e-12
Identities = 158/228 (69%), Gaps = 8/228 (4%)
Strand=Plus/Minus
Query 175949 GTCCCAAATTGACCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGTCATTC 176008
|| ||||| || |||| ||||||||||| ||||| ||||| |||| ||| | | |
Sbjct 727115 GTACCAAACTGTCCACTCGGCTCAAGGAGGTTGATGTTGTTACTACCCACATAATTTTGC 727056
Query 176009 GCCAACTTGACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCC 176068
|| | ||| || || | | || |||||| || || |||||||| | || ||
Sbjct 727055 GCAAGACCGACGATAGTCTGAGTTAGACTGACTTCGCCATGGTGGTAGGCAGTTTTCTCA 726996
Query 176069 GCCACATACGCCGCCAACTGCGCCACCTTCATCTCATCCTTG---AGGTTCTT-GTGGAA 176124
| ||||| | |||| ||| || ||||| || |||||| || ||||| || ||
Sbjct 726995 GATACATAACCGGCCAGCTGTGCGACCTTGAT---TTCCTTGACAAGATTCTTCTTGAAA 726939
Query 176125 GCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGTCGGCCAT 176172
||| ||| | |||||||||| ||| ||| || || || ||||||||
Sbjct 726938 GCA-GCAAAGATGACCTTTCGCTGACCAGGTTTAAGCCCATCGGCCAT 726892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506923921760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |