Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03-
01] 36 sequences; 19,781,320 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq19 145 1e-29
seq12 122 1e-22
seq9 82.4 1e-10
>seq19
Length=555038
Score = 145 bits (160), Expect = 1e-29
Identities = 218/310 (70%), Gaps = 0/310 (0%)
Strand=Plus/Plus
Query 7502 ACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGG 7561
|| || |||||||| | || ||| | ||||| |||||||| || |||||||||||||
Sbjct 75155 ACCTCGAAGATACCCTCCTCGATGGTCAACAAAGAAACATCGAAAGTACCACCACCCAAA 75214
Query 7562 TCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCC 7621
|| || || | |||||| | || | || ||||| || | |||||| || || ||
Sbjct 75215 TCGAAGATCAAAACGTTCTTCTCTCCCTCAGACTTCTTGTCCAAACCGTAAGCAATGGCA 75274
Query 7622 GCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCT 7681
|| || || || || || || || || ||| ||||| || || || | | |||||
Sbjct 75275 GCGGCGGTGGGCTCGTTGATGATTCGGAGAACGTTCAATCCGGCGATGACTCCGGCATCC 75334
Query 7682 TTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTG 7741
|| || || || || || || ||||| |||||||| ||||| || ||||| || ||| ||
Sbjct 75335 TTGGTGGCCTGACGCTGAGAGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCATCCTTG 75394
Query 7742 ACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAA 7801
|| | ||||| || | || ||| | || ||||| ||| || ||||| || |||
Sbjct 75395 ACGGTACCTCCGAGGTAAGCCTCGGCGGTCTCCTTCATCTTGACGAGGACCATGGAAGAA 75454
Query 7802 ATCTCTTCAG 7811
| ||| ||||
Sbjct 75455 ACCTCCTCAG 75464
Score = 131 bits (144), Expect = 2e-25
Identities = 259/381 (68%), Gaps = 2/381 (1%)
Strand=Plus/Plus
Query 7124 TTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATC 7183
|| ||||| || || ||||| |||||||| ||||| || || || | | || || |||
Sbjct 74708 TTAGGGATACGGGTGGATCCTCCGACCAAGACGATCTCGTTGACCTGAGCCTTGTCCATC 74767
Query 7184 TTTGAGTC-TCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACA 7242
|| | ||| | ||| || | |||| || ||||| |||||||||||| |||
Sbjct 74768 TTGGCGTCCTTCAAGACCTTCT-CGACGGGGTCCATGGTGGATCGGAACAAGTCCTGACA 74826
Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGA 7302
|| ||||| || | |||||||| || || || ||||| || | |||||| | || ||
Sbjct 74827 AAGCTCCTCGAACCTGGCACGGGTGATCGAGGTGTAGAAGTCGATACCGTCGAACAAGGA 74886
Query 7303 ATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGC 7362
|| || || || | || || || | ||||| || || | ||| || |||||||||||
Sbjct 74887 GTCGATCTCGATAGAGGTCTGAGCGGCAGAAGACAAGGTCCTCTTGGCACGCTCACACGC 74946
Query 7363 CGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTT 7422
||||| | || |||| |||||| | ||| ||| | || ||||| | || | ||
Sbjct 74947 GGTTCGGAGTCGTCGAACGGCACGGGCGTTGGGGGACAAGTCCTTCTTGTTCTTCCTCTT 75006
Query 7423 AAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGT 7482
||||| | |||||| | ||| | || || || || || |||||||| ||
Sbjct 75007 GAACTCCTGGACGAAGTGGTTGACGAGACGGTTGTCAAAGTCCTCTCCTCCCAAGTGGGT 75066
Query 7483 ATCCCCCGCGGTCGCTTTGAC 7503
|| || || || || |||||
Sbjct 75067 GTCTCCGGCAGTAGCCTTGAC 75087
Score = 96.9 bits (106), Expect = 4e-15
Identities = 146/207 (71%), Gaps = 3/207 (1%)
Strand=Plus/Plus
Query 7882 CTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGAT 7941
||| || | ||| | ||||| ||| | || || | ||| | ||||||| ||||||
Sbjct 75597 CTTGTAAGGCCAGTGCTTCATGTCGGCCTGAACGTCAGCGTCAGCGAACTTTCGTCCGAT 75656
Query 7942 AAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGC 8001
| ||||| || || || || ||||| | ||||||||||| |||||||| || ||
Sbjct 75657 CAATCGCTTGGCGTCGAAGACGGTGTTGTAAGGGTTCATGGCGACCTGGTTCTTGGCGGC 75716
Query 8002 GTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATT 8061
|| ||||| || || || | || | || |||||||| || ||||| ||||| ||
Sbjct 75717 ATCACCGATGAGTCGCTC---GGTGTCGTTGAAAGCGACGTAAGAGGGGGTGGTTCGGTT 75773
Query 8062 CCCTTGGTCGTTCGCAATAATTTCTAC 8088
|| |||||||| || ||||| || ||
Sbjct 75774 ACCCTGGTCGTTGGCGATAATCTCGAC 75800
>seq12
Length=840526
Score = 122 bits (134), Expect = 1e-22
Identities = 189/268 (71%), Gaps = 4/268 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || || ||||||||||| || || || ||||| || ||||| | |||| |||
Sbjct 603875 TCGAAGTCCTCTCCACCCAAGTGGGTGTCACCGGCGGTGGCCTTGACGGCGAAGACTCCT 603934
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|| | ||| || | || ||||| || ||||||||||||| ||| || ||||| |||
Sbjct 603935 CCCTGGATGGACAAGAGGGAGACATCGAATGTACCACCACCCAAGTCGAAGATGAGGACG 603994
Query 7577 TTCGTATCGTCGTCTTTG--TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634
| | || || ||| | | | ||||||||||| || ||||| || || || || |
Sbjct 603995 AGCTTCTCCTC--CTTGGACTGGGTGTCGAGACCGTAGGCAATAGCGGCGGCGGTAGGCT 604052
Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694
| || || ||||| || | || || ||||||| | || || || || || ||
Sbjct 604053 CGTTGATGATACGGAGGACCTCGAGTCCGGCAATAGCACCAGCGTCCTTGGTAGCCAATC 604112
Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGAC 7722
| || || ||||| |||||||| |||||
Sbjct 604113 GCTGAGAGTCGTTGAAGTAGGCAGGGAC 604140
>seq9
Length=951588
Score = 82.4 bits (90), Expect = 1e-10
Identities = 115/161 (71%), Gaps = 3/161 (2%)
Strand=Plus/Plus
Query 7928 AACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT 7987
|| || || ||||| | ||||| || || || || ||||| | ||||||| | | |
Sbjct 868910 AATTTCCTACCGATCAATCGCTTGGCGTCGAAGACGGTGTTCTCGGGGTTCTGAGGTCCT 868969
Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047
|||||||| || || || ||||||||||| || | || || || | || | |||
Sbjct 868970 TGGTTCTTAGCGGCATCTCCGATAAGACGCTCCTCCTT---GGTGAATCCTACCCAGGAT 869026
Query 8048 GGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088
||||| | || || ||||||||||| || || ||||||||
Sbjct 869027 GGGGTAATACGGTTTCCTTGGTCGTTAGCGATGATTTCTAC 869067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132514190240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |