Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03-
01] 36 sequences; 19,781,320 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq12 105 8e-18
>seq12
Length=840526
Score = 105 bits (116), Expect = 8e-18
Identities = 219/322 (68%), Gaps = 8/322 (2%)
Strand=Plus/Minus
Query 176689 CTTGAGAAGACTTGGCCAGAAGTAGTGAATCATATTGAGAATGAGACCCTTGATGTGGGA 176748
|||||| ||| || |||| | || | | ||||| ||| ||||| |||||||||||
Sbjct 726357 CTTGAGCAGAGAAGGATAGAAATGGTCCAAGAAATTGATAATAAGACCTTTGATGTGGGA 726298
Query 176749 ACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATACCGAAGCTCGGAA---AC 176805
|| |||| ||| |||||||||||||||||||| || || ||||| || | ||
Sbjct 726297 TCCATCGTGATCCTGATCCGTCATGATCATGAGACTGCCGTAACGAAG---GGTATCCAC 726241
Query 176806 A-TCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTT 176864
| ||||| ||||| | || | || |||| ||||| ||||| || | || |||
Sbjct 726240 ATTCTTG-TAGTCAGTGTTGTGCTTGAGCCCCATGATCTGCTTGATATGCTGGATCTCAG 726182
Query 176865 GGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTACACTTCCCACGAAGAG 176924
|||| | || ||| | | || || || || ||| ||| || || ||||
Sbjct 726181 TGTTTTTTAAGATCTGATCGGTACCAGCTTCCCGGACGTTCAGGAGCTTTCCTCGCAGAG 726122
Query 176925 GGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAACCGCGAGCGTTTTCG 176984
|||| ||||| || | || || ||||| || || ||||||| || || || | ||| |
Sbjct 726121 GGAAAACACCATAATTGTCTCGCCCAACAACCGACAGACCCGACACAGCAAGAGCTTTGG 726062
Query 176985 CAGAATCACCCTCTGTCACGAT 177006
| ||||| || || || | |||
Sbjct 726061 CTGAATCTCCTTCAGTTAGGAT 726040
Score = 96.9 bits (106), Expect = 4e-15
Identities = 190/280 (68%), Gaps = 6/280 (2%)
Strand=Plus/Minus
Query 176042 GTACCAAACTGACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAGTCATTC 176101
||||||||||| |||| ||||||||| || ||||| ||||| ||||| || | | |
Sbjct 727115 GTACCAAACTGTCCACTCGGCTCAAGGAGGTTGATGTTGTTACTACCCACATAATTTTGC 727056
Query 176102 GCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACCGTGGTGGTACGCACTCTTCTCT 176161
|| | ||| || || | | ||| |||||| || |||||||| ||| | |||||
Sbjct 727055 GCAAGACCGACGATAGTCTGAGTTAGACTGACTTCGCCATGGTGGTAGGCAGTTTTCTCA 726996
Query 176162 GCGACAAATGCCGCCAACTGCGCCACTTTCATCTCATCCTTG---AGATTCTTGTGGAAA 176218
| ||| | | |||| ||| || || || || |||||| |||||||| | ||||
Sbjct 726995 GATACATAACCGGCCAGCTGTGCGACCTTGAT---TTCCTTGACAAGATTCTTCTTGAAA 726939
Query 176219 CATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCATCCGCCATGTGTGCGATAGAA 176278
|| | || ||||| || || ||| || || ||||| ||||| | ||||||
Sbjct 726938 GCAGCAAAGATGACCTTTCGCTGACCAGGTTTAAGCCCATCGGCCATTGACGGGATAGAT 726879
Query 176279 CGCTTCAAGTCCGCCAAACTGAAGTTGACGAGGTCCTTGT 176318
|| | |||||||| |||| || || |||||||
Sbjct 726878 CGGATATTGTCCGCCATCGAGAAGAGGATCAGCTCCTTGT 726839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742120665920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |