Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03- 01] 36 sequences; 19,781,320 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq19 147 3e-30 seq12 98.7 1e-15 seq8 95.1 2e-14 seq10 91.5 2e-13 >seq19 Length=555038 Score = 147 bits (162), Expect = 3e-30 Identities = 221/314 (70%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 195630 CTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCA 195689 |||| || || |||| || ||||| | | |||||||||||||| || || ||| | Sbjct 75467 CTCCTGAGGAGGTTTCTTCCATGGTCCTCGTCAAGATGAAGGAGACCGCCGAGGCTTACC 75408 Query 195690 TGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAAC 195749 | || || || || ||||| || || || || || || ||||||| || || || | Sbjct 75407 TCGGAGGTACCGTCAAGGATGCCGTCGTCACCGTCCCCGCCTACTTCAACGACTCTCAGC 75348 Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATG 195809 | ||||| || ||||| || | | || || || | ||| ||| |||| ||||| | Sbjct 75347 GTCAGGCCACCAAGGATGCCGGAGTCATCGCCGGATTGAACGTTCTCCGAATCATCAACG 75288 Query 195810 AACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATG 195869 | || || || ||||| |||||||| ||| |||||||||| || | ||| || || | Sbjct 75287 AGCCCACCGCCGCTGCCATTGCTTACGGTTTGGACAAGAAGTCTGAGGGAGAGAAGAACG 75228 Query 195870 TATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTG 195929 | |||||||| ||| | ||||||||||| || ||||| || | | | || || | | Sbjct 75227 TTTTGATCTTCGATTTGGGTGGTGGTACTTTCGATGTTTCTTTGTTGACCATCGAGGAGG 75168 Query 195930 GTATATTCGAAGTA 195943 |||| ||||| ||| Sbjct 75167 GTATCTTCGAGGTA 75154 >seq12 Length=840526 Score = 98.7 bits (108), Expect = 1e-15 Identities = 184/269 (68%), Gaps = 6/269 (2%) Strand=Plus/Minus Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| ||||||| || || || ||| ||| || |||||||||| ||||||||| Sbjct 604140 GTCCCTGCCTACTTCAACGACTCTCAGCGATTGGCTACCAAGGACGCTGGTGCTATTGCC 604081 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || | || | || ||||| || || || || || || ||||| || ||||| Sbjct 604080 GGACTCGAGGTCCTCCGTATCATCAACGAGCCTACCGCCGCCGCTATTGCCTACGGTCTC 604021 Query 195842 GACA---AGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898 |||| || |||||| || || || | ||||| || | ||||||||||| Sbjct 604020 GACACCCAGTCCAAGGAGGAG---AAGCTCGTCCTCATCTTCGACTTGGGTGGTGGTACA 603964 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 || |||||||| || | || | || || | |||| || ||||| || || ||| Sbjct 603963 TTCGATGTCTCCCTCTTGTCCATCCAGGGAGGAGTCTTCGCCGTCAAGGCCACCGCCGGT 603904 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGA 195987 || || || | ||||| || || ||||| Sbjct 603903 GACACCCACTTGGGTGGAGAGGACTTCGA 603875 >seq8 Length=954383 Score = 95.1 bits (104), Expect = 2e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 171880 ACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATC 171939 |||||||| ||||| || |||||||||||||| ||||| || ||||| ||||| ||| || Sbjct 216043 ACCCTTACCGGAAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATCGACAACGTC 215984 Query 171940 AAAGCCAAGATTCAAGATAAGGAAGGCATTCCACC 171974 || ||||||| || || ||||| || ||||| || Sbjct 215983 AAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCC 215949 Score = 86.0 bits (94), Expect = 8e-12 Identities = 96/127 (76%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 171947 AGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAAC 172006 |||| || || ||||| || ||||| || |||||||| ||| | || || || || || | Sbjct 335422 AGATCCAGGACAAGGAGGGAATTCCCCCTGATCAGCAGCGATTGATCTTCGCCGGAAAGC 335363 Query 172007 AGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACC 172066 |||| || || ||||| || || | || |||||| | || |||||||||||| | || | Sbjct 335362 AGCTCGAGGACGGACGAACTCTTTCCGACTACAACATCCAGAAGGAGTCTACTTTGCA-C 335304 Query 172067 TTGTTCT 172073 ||| ||| Sbjct 335303 TTGGTCT 335297 >seq10 Length=921405 Score = 91.5 bits (100), Expect = 2e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 171882 CCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAA 171941 |||||| || ||||| |||||||| ||||||||||| || ||||| ||||| || |||| Sbjct 678833 CCTTACGGGTAAAACCATCACCCTTGAGGTTGAGTCTTCGGACACCATCGACAATGTCAA 678892 Query 171942 AGCCAAGATTCAAGATAAGGAAGGCATTCCACC 171974 |||||||| || || ||||| || ||||| || Sbjct 678893 GGCCAAGATCCAGGACAAGGAGGGAATTCCCCC 678925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862103961920