Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03-
01] 36 sequences; 19,781,320 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq19 147 3e-30
seq12 98.7 1e-15
seq8 95.1 2e-14
seq10 91.5 2e-13
>seq19
Length=555038
Score = 147 bits (162), Expect = 3e-30
Identities = 221/314 (70%), Gaps = 0/314 (0%)
Strand=Plus/Minus
Query 195630 CTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCA 195689
|||| || || |||| || ||||| | | |||||||||||||| || || ||| |
Sbjct 75467 CTCCTGAGGAGGTTTCTTCCATGGTCCTCGTCAAGATGAAGGAGACCGCCGAGGCTTACC 75408
Query 195690 TGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAAC 195749
| || || || || ||||| || || || || || || ||||||| || || || |
Sbjct 75407 TCGGAGGTACCGTCAAGGATGCCGTCGTCACCGTCCCCGCCTACTTCAACGACTCTCAGC 75348
Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATG 195809
| ||||| || ||||| || | | || || || | ||| ||| |||| ||||| |
Sbjct 75347 GTCAGGCCACCAAGGATGCCGGAGTCATCGCCGGATTGAACGTTCTCCGAATCATCAACG 75288
Query 195810 AACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATG 195869
| || || || ||||| |||||||| ||| |||||||||| || | ||| || || |
Sbjct 75287 AGCCCACCGCCGCTGCCATTGCTTACGGTTTGGACAAGAAGTCTGAGGGAGAGAAGAACG 75228
Query 195870 TATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTG 195929
| |||||||| ||| | ||||||||||| || ||||| || | | | || || | |
Sbjct 75227 TTTTGATCTTCGATTTGGGTGGTGGTACTTTCGATGTTTCTTTGTTGACCATCGAGGAGG 75168
Query 195930 GTATATTCGAAGTA 195943
|||| ||||| |||
Sbjct 75167 GTATCTTCGAGGTA 75154
>seq12
Length=840526
Score = 98.7 bits (108), Expect = 1e-15
Identities = 184/269 (68%), Gaps = 6/269 (2%)
Strand=Plus/Minus
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| ||||| ||||||| || || || ||| ||| || |||||||||| |||||||||
Sbjct 604140 GTCCCTGCCTACTTCAACGACTCTCAGCGATTGGCTACCAAGGACGCTGGTGCTATTGCC 604081
Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841
|| || | || | || ||||| || || || || || || ||||| || |||||
Sbjct 604080 GGACTCGAGGTCCTCCGTATCATCAACGAGCCTACCGCCGCCGCTATTGCCTACGGTCTC 604021
Query 195842 GACA---AGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898
|||| || |||||| || || || | ||||| || | |||||||||||
Sbjct 604020 GACACCCAGTCCAAGGAGGAG---AAGCTCGTCCTCATCTTCGACTTGGGTGGTGGTACA 603964
Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958
|| |||||||| || | || | || || | |||| || ||||| || || |||
Sbjct 603963 TTCGATGTCTCCCTCTTGTCCATCCAGGGAGGAGTCTTCGCCGTCAAGGCCACCGCCGGT 603904
Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGA 195987
|| || || | ||||| || || |||||
Sbjct 603903 GACACCCACTTGGGTGGAGAGGACTTCGA 603875
>seq8
Length=954383
Score = 95.1 bits (104), Expect = 2e-14
Identities = 78/95 (82%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 171880 ACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATC 171939
|||||||| ||||| || |||||||||||||| ||||| || ||||| ||||| ||| ||
Sbjct 216043 ACCCTTACCGGAAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATCGACAACGTC 215984
Query 171940 AAAGCCAAGATTCAAGATAAGGAAGGCATTCCACC 171974
|| ||||||| || || ||||| || ||||| ||
Sbjct 215983 AAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCC 215949
Score = 86.0 bits (94), Expect = 8e-12
Identities = 96/127 (76%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 171947 AGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAAC 172006
|||| || || ||||| || ||||| || |||||||| ||| | || || || || || |
Sbjct 335422 AGATCCAGGACAAGGAGGGAATTCCCCCTGATCAGCAGCGATTGATCTTCGCCGGAAAGC 335363
Query 172007 AGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACC 172066
|||| || || ||||| || || | || |||||| | || |||||||||||| | || |
Sbjct 335362 AGCTCGAGGACGGACGAACTCTTTCCGACTACAACATCCAGAAGGAGTCTACTTTGCA-C 335304
Query 172067 TTGTTCT 172073
||| |||
Sbjct 335303 TTGGTCT 335297
>seq10
Length=921405
Score = 91.5 bits (100), Expect = 2e-13
Identities = 76/93 (82%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 171882 CCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAA 171941
|||||| || ||||| |||||||| ||||||||||| || ||||| ||||| || ||||
Sbjct 678833 CCTTACGGGTAAAACCATCACCCTTGAGGTTGAGTCTTCGGACACCATCGACAATGTCAA 678892
Query 171942 AGCCAAGATTCAAGATAAGGAAGGCATTCCACC 171974
|||||||| || || ||||| || ||||| ||
Sbjct 678893 GGCCAAGATCCAGGACAAGGAGGGAATTCCCCC 678925
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657862103961920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |