Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03-
01] 36 sequences; 19,781,320 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq11 109 7e-18
seq10 100 3e-15
seq3 93.3 5e-13
>seq11
Length=855991
Score = 109 bits (120), Expect = 7e-18
Identities = 156/220 (71%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| ||||| || ||| ||||| | ||||| |||||||| || || | ||
Sbjct 727463 GCTTGGAAAGTTCACCAGGCAAGATCAACCTGACGGCAGTCTGGATTTCTCGGCTCGAGA 727522
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || || ||||| || |||| | |||||||| |||| | |||| |
Sbjct 727523 TGGTCGATCGGTTGTTGTAGACGGCCAATTTGGAAGCCTCGGTAGCGATCCTCTCGAAGA 727582
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
| ||| || || ||||||| || ||||| | |||||||||||| || ||||||||
Sbjct 727583 TATCGGCAACGAAAGAGTTCAAGATGGACATGGCCTTGTTGGAGATACCAGTGTCGGGGT 727642
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562
| ||||||||||| |||||||||||| |||| ||||| ||
Sbjct 727643 GGACCTGCTTGAGGACCTTGTAGATGTACGAGGAGTAAGA 727682
>seq10
Length=921405
Score = 100 bits (110), Expect = 3e-15
Identities = 176/254 (69%), Gaps = 2/254 (1%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
||| |||||||| || || || ||| | | | | | |||||| |||| |||||
Sbjct 131655 CTGATCGACGTATCGAGCGGTAGCGTCATAAGCTCTCAACATGGGTACGATTCCGTTACT 131714
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
| ||||| || || || | || || ||| || | ||||| | || ||
Sbjct 131715 GTAACCGTTCGTTCCGGCGATATAACTACCCTTGGCTCGAATGTTGTGAATGTTAAGACC 131774
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCT 1630243
||| || ||||| | ||||||||| | ||| || ||| || | ||||||||||| ||||
Sbjct 131775 GATTCCACCGGCGGTCTTGGAGATCATCGCACA-TGTCTTCAAGGTGTCGTAGATTCCCT 131833
Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303
| ||||||||| | |||||| | || | ||||| || || ||| ||||| | || |
Sbjct 131834 CTATCGAGTCGTCTTTCATGGCAACCAAGAAGCAAGAAGACAATTGAGGGTGAGGAGTAC 131893
Query 1630304 CGGCGTTGAAGAGC 1630317
||||||||||||||
Sbjct 131894 CGGCGTTGAAGAGC 131907
>seq3
Length=1265949
Score = 93.3 bits (102), Expect = 5e-13
Identities = 74/89 (83%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 19095 GGCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCG 19154
|| ||||||||||| || || || || ||||||||| || |||||||||||||| ||
Sbjct 468806 GGTCTCGGCGAGCCATGTTTCGATAAACTCGAGGCCGTTCTAGCCCACGCCATGCTCTCC 468865
Query 19155 ATCCCGGCCACCAAGGGATTCGAGATTGG 19183
||||| ||||||||||||||||||| ||
Sbjct 468866 ATCCCCTCCACCAAGGGATTCGAGATCGG 468894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107136245671412
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |