Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03- 01] 36 sequences; 19,781,320 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq11 109 7e-18 seq10 100 3e-15 seq3 93.3 5e-13 >seq11 Length=855991 Score = 109 bits (120), Expect = 7e-18 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| ||||| || ||| ||||| | ||||| |||||||| || || | || Sbjct 727463 GCTTGGAAAGTTCACCAGGCAAGATCAACCTGACGGCAGTCTGGATTTCTCGGCTCGAGA 727522 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || || ||||| || |||| | |||||||| |||| | |||| | Sbjct 727523 TGGTCGATCGGTTGTTGTAGACGGCCAATTTGGAAGCCTCGGTAGCGATCCTCTCGAAGA 727582 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||| || || ||||||| || ||||| | |||||||||||| || |||||||| Sbjct 727583 TATCGGCAACGAAAGAGTTCAAGATGGACATGGCCTTGTTGGAGATACCAGTGTCGGGGT 727642 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 | ||||||||||| |||||||||||| |||| ||||| || Sbjct 727643 GGACCTGCTTGAGGACCTTGTAGATGTACGAGGAGTAAGA 727682 >seq10 Length=921405 Score = 100 bits (110), Expect = 3e-15 Identities = 176/254 (69%), Gaps = 2/254 (1%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||| |||||||| || || || ||| | | | | | |||||| |||| ||||| Sbjct 131655 CTGATCGACGTATCGAGCGGTAGCGTCATAAGCTCTCAACATGGGTACGATTCCGTTACT 131714 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | ||||| || || || | || || ||| || | ||||| | || || Sbjct 131715 GTAACCGTTCGTTCCGGCGATATAACTACCCTTGGCTCGAATGTTGTGAATGTTAAGACC 131774 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCT 1630243 ||| || ||||| | ||||||||| | ||| || ||| || | ||||||||||| |||| Sbjct 131775 GATTCCACCGGCGGTCTTGGAGATCATCGCACA-TGTCTTCAAGGTGTCGTAGATTCCCT 131833 Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303 | ||||||||| | |||||| | || | ||||| || || ||| ||||| | || | Sbjct 131834 CTATCGAGTCGTCTTTCATGGCAACCAAGAAGCAAGAAGACAATTGAGGGTGAGGAGTAC 131893 Query 1630304 CGGCGTTGAAGAGC 1630317 |||||||||||||| Sbjct 131894 CGGCGTTGAAGAGC 131907 >seq3 Length=1265949 Score = 93.3 bits (102), Expect = 5e-13 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 19095 GGCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCG 19154 || ||||||||||| || || || || ||||||||| || |||||||||||||| || Sbjct 468806 GGTCTCGGCGAGCCATGTTTCGATAAACTCGAGGCCGTTCTAGCCCACGCCATGCTCTCC 468865 Query 19155 ATCCCGGCCACCAAGGGATTCGAGATTGG 19183 ||||| ||||||||||||||||||| || Sbjct 468866 ATCCCCTCCACCAAGGGATTCGAGATCGG 468894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107136245671412