Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03- 01] 36 sequences; 19,781,320 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq11 111 2e-18 >seq11 Length=855991 Score = 111 bits (122), Expect = 2e-18 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 1485493 CCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGG 1485552 ||||| |||| ||||||| ||| ||||| || ||| ||||| | ||||| |||||| Sbjct 727447 CCCTCGGAGATGGCGTGCTTGGAAAGTTCACCAGGCAAGATCAACCTGACGGCAGTCTGG 727506 Query 1485553 ATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTG 1485612 || || ||| | ||| || || ||||| | |||| | |||||||| Sbjct 727507 ATTTCTCGGCTCGAGATGGTCGATCGGTTGTTGTAGACGGCCAATTTGGAAGCCTCGGTA 727566 Query 1485613 CCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAG 1485672 |||| | |||| || ||| || || ||||||| ||| ||||| | ||||||||| Sbjct 727567 GCGATCCTCTCGAAGATATCGGCAACGAAAGAGTTCAAGATGGACATGGCCTTGTTGGAG 727626 Query 1485673 ATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAACAAAGGACGAGTACGA 1485728 || || ||||||||| ||||||||||| |||||||| | | || ||||| || Sbjct 727627 ATACCAGTGTCGGGGTGGACCTGCTTGAGGACCTTGTAGATGTACGAGGAGTAAGA 727682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916242570515804