Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03- 01] 36 sequences; 19,781,320 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq10 129 7e-25 >seq10 Length=921405 Score = 129 bits (142), Expect = 7e-25 Identities = 420/643 (65%), Gaps = 16/643 (2%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || || ||| | ||||| ||||| || || || || ||||||||||||| || || Sbjct 130536 TAAATGTTGCTAGTGTAAGGCTCGAAACATTCGTTCCATCCCAAGATTTGGGAAGTCGAA 130595 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 ||||| |||||||| || | ||| || ||| |||| || | ||| || || Sbjct 130596 GCTGTAGGCATGGGCGCAACGAGGAGCGAGTTTCGGATTCCGTGTTCGGCGATCTTGGCC 130655 Query 118302 TTGAGAGCGTCCCAGTCGTAGTTG-AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAG 118360 ||||| | |||||| || | | || | | | ||||| || |||| || Sbjct 130656 TTGAGGGAAGACCAGTCCCAGAGGGAACTGGGGGTAATTCC-CCACAAGTCGTACTGCAG 130714 Query 118361 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 118420 |||| | ||| || || ||||| | | | || || | ||||| ||| |||| Sbjct 130715 CCTACCCTCGGAAGCAGGAGATCCAGGATAAGACTGGTAAGTACCCTCCTCCTGGGCCAT 130774 Query 118421 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAAT--GCGAGCATTCA-T 118477 ||||| |||||| ||||| |||||||| || |||||||| || || || || | | Sbjct 130775 CTCGGAAGACGCCTCCAGGGCGGCGTGATAGATGGTTTCAAAGATCTGCAAG--TTGAGT 130832 Query 118478 TGCCTTG-GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGAC 118536 || | | | | ||| ||| || | | || | ||||| ||| ||||||| Sbjct 130833 TGACGAGCGGCAGGTCC--ATCGAAGGGCATACGCAAGGCCATAAAGGTATCAGCGAGAC 130890 Query 118537 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGG 118596 |||| |||||||| || || || | || | ||| ||||| ||| || || |||| Sbjct 130891 CTTGAACACCGAGTCCGATAGGTCTGTGACGCATGTTAGAGTTCTTGGCTTCCTGAACGG 130950 Query 118597 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 118656 | ||| | || |||||| ||| | || | || |||||||| ||||| |||| | || Sbjct 130951 GGTAATAGTTGACATCGATGACCTTGTTCAAGTTCTTGGTGACGACCTTGGTGACCTGAT 131010 Query 118657 GAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTG 118716 ||||||| | | |||| | | || | | ||| | || || |||| | Sbjct 131011 GAAGCTTCTTGAAATCGTA--TTCG----CCGTTGGTGATGAAGGCGGGCAGCGCGAGGG 131064 Query 118717 ACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACA 118776 | |||| ||||| || | | |||||| | ||| |||||| || || || || |||| Sbjct 131065 AGGCCAAGTTACAGACGGCGACCTCATCAGGAGCAGAGTACTCGATGATCTCGGTACACA 131124 Query 118777 AGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTT 118819 |||| ||| ||| ||||| |||||||| | || ||||| || Sbjct 131125 AGTTGGAAGACTTGATGGTTCCCAAGTTTTGCTGGTTTGATTT 131167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434921704160