Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03-
01] 36 sequences; 19,781,320 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq12 102 1e-16
>seq12
Length=840526
Score = 102 bits (112), Expect = 1e-16
Identities = 218/322 (68%), Gaps = 8/322 (2%)
Strand=Plus/Minus
Query 169126 CTTGAGAAGACTTGGCCAGAAGTAGTGAATCATATTGAGAATGAGACCCTTGATGTGGGA 169185
|||||| ||| || |||| | || | | ||||| ||| ||||| |||||||||||
Sbjct 726357 CTTGAGCAGAGAAGGATAGAAATGGTCCAAGAAATTGATAATAAGACCTTTGATGTGGGA 726298
Query 169186 ACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATACCGAAGCTCGGAA---AC 169242
|| |||| ||| |||||||||||||||||||| || || ||||| || | ||
Sbjct 726297 TCCATCGTGATCCTGATCCGTCATGATCATGAGACTGCCGTAACGAAG---GGTATCCAC 726241
Query 169243 A-TCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTT 169301
| ||||| ||||| | || | || |||| ||||| ||||| || | || |||
Sbjct 726240 ATTCTTG-TAGTCAGTGTTGTGCTTGAGCCCCATGATCTGCTTGATATGCTGGATCTCAG 726182
Query 169302 GGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTACACTTCCCACGAAGAG 169361
|||| | || ||| | | || || || || ||| ||| || || ||||
Sbjct 726181 TGTTTTTTAAGATCTGATCGGTACCAGCTTCCCGGACGTTCAGGAGCTTTCCTCGCAGAG 726122
Query 169362 GGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCG 169421
|||| ||||| || | || || ||||| || || ||||||| || || |||| || |
Sbjct 726121 GGAAAACACCATAATTGTCTCGCCCAACAACCGACAGACCCGACACAGCAAGAGCTTTGG 726062
Query 169422 CCGAGTCACCCTCGGTGACGAT 169443
| || || || || || | |||
Sbjct 726061 CTGAATCTCCTTCAGTTAGGAT 726040
Score = 95.1 bits (104), Expect = 1e-14
Identities = 192/281 (68%), Gaps = 8/281 (3%)
Strand=Plus/Minus
Query 168479 GTACCAAACTGACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAGTCATTC 168538
||||||||||| |||| ||||||||| || ||||| ||||| ||||| || | | |
Sbjct 727115 GTACCAAACTGTCCACTCGGCTCAAGGAGGTTGATGTTGTTACTACCCACATAATTTTGC 727056
Query 168539 GCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACCGTGGTGGTACGCACTCTTCTCT 168598
|| | ||| || || | | ||| |||||| || |||||||| ||| | |||||
Sbjct 727055 GCAAGACCGACGATAGTCTGAGTTAGACTGACTTCGCCATGGTGGTAGGCAGTTTTCTCA 726996
Query 168599 GCGACAAATGCCGCCAACTGCGCCACTTTCATCTCATCCTTG---AGATTCTT-GTGGAA 168654
| ||| | | |||| ||| || || || || |||||| |||||||| || ||
Sbjct 726995 GATACATAACCGGCCAGCTGTGCGACCTTGAT---TTCCTTGACAAGATTCTTCTTGAAA 726939
Query 168655 GCATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCATCCGCCATGTGTGCGATAGA 168714
||| || | || ||||| || || ||| || || ||||| ||||| | ||||||
Sbjct 726938 GCA-GCAAAGATGACCTTTCGCTGACCAGGTTTAAGCCCATCGGCCATTGACGGGATAGA 726880
Query 168715 ACGCTTCAAGTCCGCCAAACTGAAGTTGACGAGGTCCTTGT 168755
|| | |||||||| |||| || || |||||||
Sbjct 726879 TCGGATATTGTCCGCCATCGAGAAGAGGATCAGCTCCTTGT 726839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260537532640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |