Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03- 01] 36 sequences; 19,781,320 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq12 102 1e-16 >seq12 Length=840526 Score = 102 bits (112), Expect = 1e-16 Identities = 218/322 (68%), Gaps = 8/322 (2%) Strand=Plus/Minus Query 169126 CTTGAGAAGACTTGGCCAGAAGTAGTGAATCATATTGAGAATGAGACCCTTGATGTGGGA 169185 |||||| ||| || |||| | || | | ||||| ||| ||||| ||||||||||| Sbjct 726357 CTTGAGCAGAGAAGGATAGAAATGGTCCAAGAAATTGATAATAAGACCTTTGATGTGGGA 726298 Query 169186 ACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATACCGAAGCTCGGAA---AC 169242 || |||| ||| |||||||||||||||||||| || || ||||| || | || Sbjct 726297 TCCATCGTGATCCTGATCCGTCATGATCATGAGACTGCCGTAACGAAG---GGTATCCAC 726241 Query 169243 A-TCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTT 169301 | ||||| ||||| | || | || |||| ||||| ||||| || | || ||| Sbjct 726240 ATTCTTG-TAGTCAGTGTTGTGCTTGAGCCCCATGATCTGCTTGATATGCTGGATCTCAG 726182 Query 169302 GGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTACACTTCCCACGAAGAG 169361 |||| | || ||| | | || || || || ||| ||| || || |||| Sbjct 726181 TGTTTTTTAAGATCTGATCGGTACCAGCTTCCCGGACGTTCAGGAGCTTTCCTCGCAGAG 726122 Query 169362 GGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCG 169421 |||| ||||| || | || || ||||| || || ||||||| || || |||| || | Sbjct 726121 GGAAAACACCATAATTGTCTCGCCCAACAACCGACAGACCCGACACAGCAAGAGCTTTGG 726062 Query 169422 CCGAGTCACCCTCGGTGACGAT 169443 | || || || || || | ||| Sbjct 726061 CTGAATCTCCTTCAGTTAGGAT 726040 Score = 95.1 bits (104), Expect = 1e-14 Identities = 192/281 (68%), Gaps = 8/281 (3%) Strand=Plus/Minus Query 168479 GTACCAAACTGACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAGTCATTC 168538 ||||||||||| |||| ||||||||| || ||||| ||||| ||||| || | | | Sbjct 727115 GTACCAAACTGTCCACTCGGCTCAAGGAGGTTGATGTTGTTACTACCCACATAATTTTGC 727056 Query 168539 GCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACCGTGGTGGTACGCACTCTTCTCT 168598 || | ||| || || | | ||| |||||| || |||||||| ||| | ||||| Sbjct 727055 GCAAGACCGACGATAGTCTGAGTTAGACTGACTTCGCCATGGTGGTAGGCAGTTTTCTCA 726996 Query 168599 GCGACAAATGCCGCCAACTGCGCCACTTTCATCTCATCCTTG---AGATTCTT-GTGGAA 168654 | ||| | | |||| ||| || || || || |||||| |||||||| || || Sbjct 726995 GATACATAACCGGCCAGCTGTGCGACCTTGAT---TTCCTTGACAAGATTCTTCTTGAAA 726939 Query 168655 GCATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCATCCGCCATGTGTGCGATAGA 168714 ||| || | || ||||| || || ||| || || ||||| ||||| | |||||| Sbjct 726938 GCA-GCAAAGATGACCTTTCGCTGACCAGGTTTAAGCCCATCGGCCATTGACGGGATAGA 726880 Query 168715 ACGCTTCAAGTCCGCCAAACTGAAGTTGACGAGGTCCTTGT 168755 || | |||||||| |||| || || ||||||| Sbjct 726879 TCGGATATTGTCCGCCATCGAGAAGAGGATCAGCTCCTTGT 726839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260537532640