Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03- 01] 36 sequences; 19,781,320 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq10 138 1e-27 >seq10 Length=921405 Score = 138 bits (152), Expect = 1e-27 Identities = 435/666 (65%), Gaps = 30/666 (5%) Strand=Plus/Plus Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566 |||||| || |||| | || || ||| |||||| | ||||| ||||||||| || Sbjct 130508 GAACTCTCCAGCCAAGACACGTCGAGTGTAAATGTTGCTAGTGTAAGGCTCGAAACATTC 130567 Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626 ||| |||| ||| |||| ||||| || || |||||||| || || || || || || Sbjct 130568 GTTCCATCCCAAGATTTGGGAAGTCGAAGCTGTAGGCATGGGCGCAACGAGGAGCGAGTT 130627 Query 78627 CCGAAGACCATG--CGTCTTGATCTCGACCTTTAGG------CCGTCCCAAAATTCATTC 78678 || | || || || | ||||| | |||| ||| | |||||| | | | Sbjct 130628 TCGGATTCCGTGTTCGGC--GATCTTGGCCTTGAGGGAAGACCAGTCCCAGAGGGAACTG 130685 Query 78679 GCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAAC 78738 | | || ||||||| ||| || || |||||||||| || || || || | Sbjct 130686 GGGGTAATTCCCCACAAGTCGTACTGCAGCCTACCCTCGGAAGCAGGAGATCCAGGATAA 130745 Query 78739 GTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTAC 78798 | || ||||| |||||||||| ||| | ||| | ||| | |||||| ||||| || Sbjct 130746 GACTGGTAAGTACCCTCCTCCTGGGCCATCTCGGAAGACGCCTCCAGGGCGGCGTGATAG 130805 Query 78799 ACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCCG 78858 | | || ||||| | |||||| | || || | | ||| | |||| ||| Sbjct 130806 ATGGTTTCAAAGATCTGCAAGTTGAGTTGACGAGC----GGCAGGTCCATCGAAGGGCAT 130861 Query 78859 A-GCAT---CATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCG 78914 | ||| ||| ||| ||| || || || || || |||| |||| |||| ||| || Sbjct 130862 ACGCAAGGCCATAAAGGTATCAGCGAGACCTTGAACACCGAGTCCGATAGGTCTGTGACG 130921 Query 78915 CATGTT---GCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTT 78971 |||||| | |||| ||| ||| |||||| |||| ||||||||| ||| Sbjct 130922 CATGTTAGAGTTCTT---GGCTTCCTGAACGGGGTAATAGTTGACATCGATGACCTTGTT 130978 Query 78972 CAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGATTTCC 79031 || ||| ||||||||| || |||| | | || |||||| | | || Sbjct 130979 CAAGTTCTTGGTGACGACCTTGGTGACCTGATGAAGCTTCTTGAAATCGTATTCG---CC 131035 Query 79032 TTTGATGA--AAGTCGGTAGGCAC-AGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGG 79088 ||| ||| ||| ||| || | || || |||| ||| || ||||| ||| || || Sbjct 131036 GTTGGTGATGAAGGCGGGCAGCGCGAGGGAGGCCAAGTTACAGACGGCGACCTCATCAGG 131095 Query 79089 GCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTT 79148 ||| ||||||||| || || ||||| || || ||||||||||| || | ||| | Sbjct 131096 AGCAGAGTACTCGATGATCTCGGTACACAAGTTGGAAGACTTGATGGTTCCCAAGTTTTG 131155 Query 79149 CTGGTT 79154 |||||| Sbjct 131156 CTGGTT 131161 Score = 114 bits (126), Expect = 1e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677 ||||||| || |||| |||||| ||||| ||| |||||| |||||||| | || Sbjct 130324 CTCAAGGCGATCTACAAGACCGTCTGGGAGATCAGTCAGAAGGCTGTCATCGACCTCGCT 130265 Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737 |||||||| || |||| ||||||||||| ||||| | || || | || || || Sbjct 130264 GCCGATCGTGGTGCCTTTATCGACCAGTCTCAGTCCTTGAACGTTCACTTGACCAACCCT 130205 Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797 | ||| || ||| |||||||| | ||||| ||| | ||||| |||||||| || Sbjct 130204 TCCATGGGACAGTTGACTTCCATGCACTTTTACGGGTGGAAGAAGGGTCTCAAGACTGGA 130145 Query 20798 ATGTACTATCTGCGGACCCGA 20818 |||||||| ||| |||| ||| Sbjct 130144 ATGTACTACCTGAGGACTCGA 130124 Score = 111 bits (122), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 |||||||| || |||||||||||||||||||| ||||| | |||||| | || || Sbjct 130137 TAGTACATTCCAGTCTTGAGACCCTTCTTCCACCCGTAAAAGTGCATGGAAGTCAACTGT 130196 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 ||| ||||| || | | ||| | ||||| ||||||||||| | ||||| Sbjct 130197 CCCATGGAAGGGTTGGTCAAGTGAACGTTCAAGGACTGAGACTGGTCGATAAAGGCACCA 130256 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378 || ||||| || | ||||||||| | ||| || |||||||||| |||| ||| || Sbjct 130257 CGATCGGCAGCGAGGTCGATGACAGCCTTCTGACTGATCTCCCAGACGGTCTTGTAGATC 130316 Query 78379 GCCTTCAGCTC 78389 ||||| ||||| Sbjct 130317 GCCTTGAGCTC 130327 Score = 104 bits (114), Expect = 3e-17 Identities = 423/665 (64%), Gaps = 10/665 (2%) Strand=Plus/Minus Query 19841 GCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATC 19900 ||||| ||||| ||| | ||| | || | |||||||| |||||| ||||||| || ||| Sbjct 131170 GCCAAATCAAACCAGCAAAACTTGGGAACCATCAAGTCTTCCAACTTGTGTACCGAGATC 131111 Query 19901 ATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTGCCTGCCG 19960 || ||| || || || ||| ||||| ||||| |||| ||||| ||||| Sbjct 131110 ATCGAGTACTCTGCTCCTGATGAGGTCGCCGTCTGTAACTTGGCCTCCCTCGCGCTGCCC 131051 Query 19961 ACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTC 20020 | ||| ||| | | | ||| || || | | |||| ||| ||||||| Sbjct 131050 GCCTTCATCACCAACGGCGAATACGATTTCAAGAAGCTTCATCAGGTCACCAAGGTCGTC 130991 Query 20021 ACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGACCGAGGCGGCGCGCAAG 20080 || || |||| ||||||||| |||| |||||| ||| || || Sbjct 130990 ACCAAGAACTTGAACAAGGTCATCGATGTCAACTATTACCCCGTTCAGGAAGCCAAGAAC 130931 Query 20081 TCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATG 20140 || || ||||| ||| | || |||| |||| || || || || || || || ||| Sbjct 130930 TCTAACATGCGTCACAGACCTATCGGACTCGGTGTTCAAGGTCTCGCTGATACCTTTATG 130871 Query 20141 ATGCTCGGCCTCT--CATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCG 20198 || || | | | ||||| | || || || | |||||| | ||||| | Sbjct 130870 --GCCTTGCGTATGCCCTTCGATGGACCTGCCGCTCGTCAACTCAACTTGCAGATCTTTG 130813 Query 20199 AGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGT 20258 | || | || ||||| ||||| || || | ||| | ||| | ||||| || | | Sbjct 130812 AAACCATCTATCACGCCGCCCTGGAGGCGTCTTCCGAGATGGCCCAGGAGGAGGGTACTT 130753 Query 20259 ACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGCG 20318 || || | | || || || || |||||||||| || ||| ||| ||||||| Sbjct 130752 ACCAGTCTTATCCTGGATCTCCTGCTTCCGAGGGTAGGCTGCAGTACGACTTGTGGGGAA 130693 Query 20319 TCACTGAGAATGAGTTTTGGAGCG------CCCTCAAGGTTGAGATCAAGACCCACGGGC 20372 | || | | | ||| | ||||||||| ||||| ||||| Sbjct 130692 TTACCCCCAGTTCCCTCTGGGACTGGTCTTCCCTCAAGGCCAAGATCGCCGAACACGGAA 130633 Query 20373 TTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGA 20432 | || |||||| | ||||| ||||||||||| || || ||||| |||| ||| |||| Sbjct 130632 TCCGAAACTCGCTCCTCGTTGCGCCCATGCCTACAGCTTCGACTTCCCAAATCTTGGGAT 130573 Query 20433 ACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTGCGTCGTACACTGGCCGGTG 20492 ||||| ||||||||| ||||| | |||||| ||| || ||| |||| || | Sbjct 130572 GGAACGAATGTTTCGAGCCTTACACTAGCAACATTTACACTCGACGTGTCTTGGCTGGAG 130513 Query 20493 AGTTC 20497 ||||| Sbjct 130512 AGTTC 130508 Score = 98.7 bits (108), Expect = 1e-15 Identities = 178/258 (69%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 79531 CCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCG 79590 || ||||| | |||||| || || || || || ||| | |||||| ||||| ||| Sbjct 131650 CCACCCTGATCGACGTATCGAGCGGTAGCGTCATAAGCTCTCAACATGGGTACGATTCCG 131709 Query 79591 TCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTG 79649 | | |||||||| ||| ||| |||| | || |||||||| | | | || Sbjct 131710 TTACTGTAACCGTTCGTTCCGGCGATATAACTACCCTTGGCTCGAATGTT-GTGAATGTT 131768 Query 79650 GATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGAT 79709 | ||||| || |||| ||||||||| ||| || ||| | || |||||||| Sbjct 131769 AAGACCGATTCCACCGGCGGTCTTGGAGATCATCGCACATGTCTTCAAGGTGTCGTAGAT 131828 Query 79710 GCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTT 79769 ||||| ||||||||||| ||||| || |||| |||||| |||| || |||| Sbjct 131829 TCCCTCTATCGAGTCGTCTTTCATGGCAACCAAGAAGCAAGAAGACAATTGAGGGTGAGG 131888 Query 79770 CGTACCGGCGTTGAAGAG 79787 ||||||||||||||||| Sbjct 131889 AGTACCGGCGTTGAAGAG 131906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524553163840