Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03- 01] 36 sequences; 19,781,320 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq10 147 2e-30 seq12 102 9e-17 >seq10 Length=921405 Score = 147 bits (162), Expect = 2e-30 Identities = 181/243 (74%), Gaps = 7/243 (3%) Strand=Plus/Minus Query 55689 ACGGGGGGTCCGTCCAGAAT----CTGGAGATTCCT-CTGCGTCTCAAGGAGATTTACCG 55743 |||| || |||||||||||| |||| | | ||| | | | ||||||| ||| ||| Sbjct 130365 ACGGTGGATCCGTCCAGAATATCCCTGGTG-TCCCTGCCGAG-CTCAAGGCGATCTACAA 130308 Query 55744 GACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTA 55803 ||| || |||||||| |||||| | | || ||| | ||| ||||||||||| | Sbjct 130307 GACCGTCTGGGAGATCAGTCAGAAGGCTGTCATCGACCTCGCTGCCGATCGTGGTGCCTT 130248 Query 55804 CATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAG 55863 ||||||||||| ||||| ||||| | | || || ||||| ||| |||||| Sbjct 130247 TATCGACCAGTCTCAGTCCTTGAACGTTCACTTGACCAACCCTTCCATGGGACAGTTGAC 130188 Query 55864 CTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 || |||||||||||||||||||||||||| |||||||| || |||||||| ||| |||| Sbjct 130187 TTCCATGCACTTTTACGGGTGGAAGAAGGGTCTCAAGACTGGAATGTACTACCTGAGGAC 130128 Query 55924 CCG 55926 || Sbjct 130127 TCG 130125 Score = 105 bits (116), Expect = 7e-18 Identities = 154/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 53575 CATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCA 53634 ||||||||||||||| |||||||||||| | | || ||| |||| || || |||||| Sbjct 131569 CATCTACCTCGAGCCTTGGCACGCCGACGTGTTCGACTTTATCGATCTTCGAAAGAATCA 131510 Query 53635 GGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCT 53693 || | ||||| | || ||||| |||| ||| || || ||||| || || || | Sbjct 131509 CGGAAAGGAAGAAGTCCGAGCGCGTGATTTGTTCTAC-GCGCTCTGGATCCCCGATCTTT 131451 Query 53694 TCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCG 53753 |||||| | ||||| |||||| || ||| |||||||||| ||||| || || | Sbjct 131450 TCATGCGACGAGTGGAAGAGGACGGTGAATGGACTTTGATGTGCCCTAACGATTGTCCTG 131391 Query 53754 GCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788 | ||| | ||| |||| || ||||| ||||| Sbjct 131390 GACTCGCCGAGGTCCACGGAAAGAAGTTTGACGAG 131356 >seq12 Length=840526 Score = 102 bits (112), Expect = 9e-17 Identities = 175/245 (71%), Gaps = 12/245 (5%) Strand=Plus/Minus Query 117353 GTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGA 117412 ||||| || |||||||||||||| | |||||| | |||||| |||||| | ||||| Sbjct 727115 GTACCAAACTGTCCACTCGGCTCAAGGAGGTTGATGTTGTTACTACCCACATAATTTTGC 727056 Query 117413 GCCAAGTTGACAATCGTACCTTGG--AGGCTCGCCTCACCATGGTGATACGCCGTCTGCT 117470 || | ||| || || || | || || | || |||||||| || || || | || Sbjct 727055 GCAAGACCGACGATAGT--CTGAGTTAGACTGACTTCGCCATGGTGGTAGGCAGTTTTCT 726998 Query 117471 CCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTG-A 117527 | | || || || |||||||| || ||||| || || |||| || ||||||||| | Sbjct 726997 CAGATACATAACCGGCCAGCTGTGCGACCTTGATTTCCTTGAC--AAGATTCTTCTTGAA 726940 Query 117528 GGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGA-GGGATC 117586 ||| ||| | || ||||| ||||||| || || || ||||| |||| ||| ||||| Sbjct 726939 AGCA-GCAAAGATGACCTTTCGCTGACCAGGTTTAAGCCCATCGGCCA-TTGACGGGATA 726882 Query 117587 GAACG 117591 || || Sbjct 726881 GATCG 726877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215753752800