Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03- 01] 36 sequences; 19,781,320 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq8 87.8 2e-12 seq10 86.0 7e-12 >seq8 Length=954383 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 27493 ATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAA 27552 || |||||||||||||||||||| || || |||||||| | || || || || ||||| Sbjct 335420 ATCCAGGACAAGGAGGGAATTCCCCCTGATCAGCAGCGATTGATCTTCGCCGGAAAGCAG 335361 Query 27553 CTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTA 27612 |||||||| | || || || | ||||| || |||| ||||| || ||| | || | Sbjct 335360 CTCGAGGACGGACGAACTCTTTCCGACTACAACATCCAGAAGGAGTCTACTTTGCACTTG 335301 Query 27613 GTCTTG 27618 |||||| Sbjct 335300 GTCTTG 335295 >seq10 Length=921405 Score = 86.0 bits (94), Expect = 7e-12 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 80035 CGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATA 80094 || |||| ||| |||||||| || |||||||| ||||||||||| ||||| | |||||| Sbjct 130125 CGAGTCCTCAGGTAGTACATTCCAGTCTTGAGACCCTTCTTCCACCCGTAAAAGTGCATG 130184 Query 80095 GAACTGAGCT-TCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACA 80153 ||| | | || || || | | ||||| || | | ||||| ||||||||||| Sbjct 130185 GAAGTCAACTGTCCCATG-GAAGGGTTGGTCAAGTGAACGTTCAAGGACTGAGACTGGTC 130243 Query 80154 GATGAAAGCCCCACGATCTGCCGC 80177 ||| || || |||||||| || || Sbjct 130244 GATAAAGGCACCACGATCGGCAGC 130267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310143360320