Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03-
01] 36 sequences; 19,781,320 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq8 87.8 2e-12
seq10 86.0 7e-12
>seq8
Length=954383
Score = 87.8 bits (96), Expect = 2e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 27493 ATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAA 27552
|| |||||||||||||||||||| || || |||||||| | || || || || |||||
Sbjct 335420 ATCCAGGACAAGGAGGGAATTCCCCCTGATCAGCAGCGATTGATCTTCGCCGGAAAGCAG 335361
Query 27553 CTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTA 27612
|||||||| | || || || | ||||| || |||| ||||| || ||| | || |
Sbjct 335360 CTCGAGGACGGACGAACTCTTTCCGACTACAACATCCAGAAGGAGTCTACTTTGCACTTG 335301
Query 27613 GTCTTG 27618
||||||
Sbjct 335300 GTCTTG 335295
>seq10
Length=921405
Score = 86.0 bits (94), Expect = 7e-12
Identities = 107/144 (74%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 80035 CGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATA 80094
|| |||| ||| |||||||| || |||||||| ||||||||||| ||||| | ||||||
Sbjct 130125 CGAGTCCTCAGGTAGTACATTCCAGTCTTGAGACCCTTCTTCCACCCGTAAAAGTGCATG 130184
Query 80095 GAACTGAGCT-TCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACA 80153
||| | | || || || | | ||||| || | | ||||| |||||||||||
Sbjct 130185 GAAGTCAACTGTCCCATG-GAAGGGTTGGTCAAGTGAACGTTCAAGGACTGAGACTGGTC 130243
Query 80154 GATGAAAGCCCCACGATCTGCCGC 80177
||| || || |||||||| || ||
Sbjct 130244 GATAAAGGCACCACGATCGGCAGC 130267
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310143360320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |