Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03-
01] 36 sequences; 19,781,320 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq8 100 7e-16
seq5 86.0 1e-11
>seq8
Length=954383
Score = 100 bits (110), Expect = 7e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
||| | ||| | ||| ||||| || |||||||| || || | ||| || | ||| || ||
Sbjct 335298 GACCAAGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGTCCGTCCTC 335357
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024
|||||||| || |||||||| | || || || ||||| |||| ||| |||||||||||
Sbjct 335358 GAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGATCAGGGGGAATTCCCTCCTTGTCCTG 335417
Query 211025 GATCT 211029
|||||
Sbjct 335418 GATCT 335422
Score = 95.1 bits (104), Expect = 3e-14
Identities = 79/97 (81%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 211002 GGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT 211061
||||||| ||| ||||||||||||||||| || ||||| ||||||||||| |||
Sbjct 215949 GGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGAC 216008
Query 211062 TCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCT 211098
|| |||||||| ||||| |||||||| || || ||||
Sbjct 216009 TCGACCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCT 216045
>seq5
Length=1078880
Score = 86.0 bits (94), Expect = 1e-11
Identities = 122/172 (71%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 139810 CCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAGGAA 139869
|| |||||||||||| |||||||||| |||||||||||||| | || ||| | |||
Sbjct 857970 CCCAAGAAGCACGGACGAGGAGGACAGTCTGCTCTGCGTTTCTCCCGTCTCCGAGACGAA 858029
Query 139870 AAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAAAGAC 139929
||| | ||||||||| | | ||||| || ||| || | ||| ||| |||| | |
Sbjct 858030 AAGCGACACAACTACGTTCGTAAAGTCGCCGAGTTGGCCGTTCAGCATTTCATCACTGCC 858089
Query 139930 AACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGA 139981
||||| || |||| | || ||||| ||| ||||| |||||||
Sbjct 858090 GACAAGGTCAACGTCACTGGGTTGGTCTTGGCCGGTAGTGCAGATTTCAAGA 858141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151465341140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |