Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03- 01] 36 sequences; 19,781,320 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq8 100 7e-16 seq5 86.0 1e-11 >seq8 Length=954383 Score = 100 bits (110), Expect = 7e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| | ||| | ||| ||||| || |||||||| || || | ||| || | ||| || || Sbjct 335298 GACCAAGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGTCCGTCCTC 335357 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 |||||||| || |||||||| | || || || ||||| |||| ||| ||||||||||| Sbjct 335358 GAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGATCAGGGGGAATTCCCTCCTTGTCCTG 335417 Query 211025 GATCT 211029 ||||| Sbjct 335418 GATCT 335422 Score = 95.1 bits (104), Expect = 3e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 211002 GGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT 211061 ||||||| ||| ||||||||||||||||| || ||||| ||||||||||| ||| Sbjct 215949 GGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGAC 216008 Query 211062 TCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCT 211098 || |||||||| ||||| |||||||| || || |||| Sbjct 216009 TCGACCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCT 216045 >seq5 Length=1078880 Score = 86.0 bits (94), Expect = 1e-11 Identities = 122/172 (71%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 139810 CCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAGGAA 139869 || |||||||||||| |||||||||| |||||||||||||| | || ||| | ||| Sbjct 857970 CCCAAGAAGCACGGACGAGGAGGACAGTCTGCTCTGCGTTTCTCCCGTCTCCGAGACGAA 858029 Query 139870 AAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAAAGAC 139929 ||| | ||||||||| | | ||||| || ||| || | ||| ||| |||| | | Sbjct 858030 AAGCGACACAACTACGTTCGTAAAGTCGCCGAGTTGGCCGTTCAGCATTTCATCACTGCC 858089 Query 139930 AACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGA 139981 ||||| || |||| | || ||||| ||| ||||| ||||||| Sbjct 858090 GACAAGGTCAACGTCACTGGGTTGGTCTTGGCCGGTAGTGCAGATTTCAAGA 858141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151465341140