Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03-
01] 36 sequences; 19,781,320 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq20 91.5 1e-13
>seq20
Length=503195
Score = 91.5 bits (100), Expect = 1e-13
Identities = 110/147 (75%), Gaps = 2/147 (1%)
Strand=Plus/Minus
Query 27133 TGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGT-GGAC 27191
|||||| | ||||| |||||||||||| |||||| || |||||||||| ||| |||
Sbjct 143570 TGAGTCATGAGCGGCTCCACGTGATCCTTGTAGACATGCGCGTCTCCCA-TTTGTAGGAT 143512
Query 27192 AAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCT 27251
|||||| ||||| ||||||| || || ||||||| || | || ||||||
Sbjct 143511 AAACTCGTGAGGTTCAGTGTCGGTGACATGGGCGATCATGTGTGTCAACAGCGAGTAGGA 143452
Query 27252 GGCGATGTTAAAGGGTACCCCGAGCCC 27278
|||||||| |||||||| || || ||
Sbjct 143451 AGCGATGTTGAAGGGTACGCCTAGTCC 143425
Score = 87.8 bits (96), Expect = 1e-12
Identities = 169/247 (68%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 27385 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 27444
|||||||| |||| || ||| || || | || ||||||||| |||| || | |
Sbjct 143232 GGGTTCCAAGCGCTCATGATTATCCGTCGATCCGTCGGGTTGTTCTTGATCTTATCGATG 143173
Query 27445 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACC-CTCATGTCCGTGTACTC 27503
| | |||| |||||||||||| || | || || || | || |||| |||||
Sbjct 143172 ACCTGCTGCAACTGATCCACCCCTTGACCAGTATAATCGTCCTCGCACGTCCC-GTACTT 143114
Query 27504 TGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 27563
||| |||||||| ||||||||||| ||||| || || || || ||||| || | ||
Sbjct 143113 TGCCCCGAAATGTCTCCATTGGAATCCGTAGACGGGACCGAGATCTCCGACTCGTCGATG 143054
Query 27564 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 27623
||| || ||||||||| | || | || ||||| | ||||| ||| || ||
Sbjct 143053 ACCGAGCCCGATCTTGTCCAGGTATTCACGAGATCCGTTCCCTTCCCAAATCCCAACTCC 142994
Query 27624 CTTCTCG 27630
||| |||
Sbjct 142993 CTTGTCG 142987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369507037878716
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |