Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Filobasidium_20wieringae_20[genbank_20GCA_5F001600055.1_202016-03- 01] 36 sequences; 19,781,320 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq8 104 6e-17 >seq8 Length=954383 Score = 104 bits (114), Expect = 6e-17 Identities = 101/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 178006 AGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAAC 178065 |||| |||||||| || ||||| || || || ||||| ||| | |||||||||||||| | Sbjct 335422 AGATCCAGGACAAGGAGGGAATTCCCCCTGATCAGCAGCGATTGATCTTCGCCGGAAAGC 335363 Query 178066 AGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATC 178125 ||||||| || ||| | |||||| |||| || ||| |||| || || || || |||| Sbjct 335362 AGCTCGAGGACGGACGAACTCTTTCCGACTACAACATCCAGAAGGAGTCTACTTTGCACT 335303 Query 178126 TTGTTTTGAG 178135 | || ||||| Sbjct 335302 TGGTCTTGAG 335293 Score = 87.8 bits (96), Expect = 4e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 177939 ACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTC 177998 || || || ||||| || |||||||||||||| || ||| ||||||||||| |||||| Sbjct 216043 ACCCTTACCGGAAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATCGACAACGTC 215984 Query 177999 AAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || ||||| |||||||| || ||||| |||||| Sbjct 215983 AAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCG 215948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730644778984