Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq150 143 6e-29 >seq150 Length=1432513 Score = 143 bits (158), Expect = 6e-29 Identities = 142/184 (77%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 230435 TTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAG 230494 |||| || |||| || ||||||||||| ||| ||| | ||||||||||| ||||| | Sbjct 455719 TTCCTTGCGGCCTAATCGGCATGAACGCGACACTCATGTGCCAGTACATCGAGTTCGTTG 455778 Query 230495 CCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTG 230554 |||||||| || | || || || ||| || ||| ||||||||| ||||||||| | Sbjct 455779 CCGACCGCCTTCTCGTCGCGCTCGGTGACCCGAAGGTGTACAACGTGTCGAACCCCTTCG 455838 Query 230555 CATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTG 230614 || ||||| | || ||||| || |||||||||||||||||||| ||||||||| | Sbjct 455839 ACTTCATGGACATGATCTCGCTCCAGGGGAAGACCAACTTCTTCGAGAAGCGTGTCTCCG 455898 Query 230615 ACTA 230618 |||| Sbjct 455899 ACTA 455902 Score = 98.7 bits (108), Expect = 2e-15 Identities = 132/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 230435 TTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAG 230494 |||| ||| || || ||||||||||| | || ||| | ||||| ||||| || || | Sbjct 453022 TTCCCTGTGCGCTCATCGGCATGAACGCACAGCTGATGTGCCAGTATATCGAGTTTGTCG 452963 Query 230495 CCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTG 230554 ||||| | | || || | || || ||| ||| ||| | | | || || |||| Sbjct 452962 CCGACAGACTGTTGGTATCGCTAGGGAACGCAAAACATTACCATGCAACAAATCCGTTTG 452903 Query 230555 CATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTG 230614 || ||||| | ||||||||||| |||||||||||||||||||| ||||| ||| | Sbjct 452902 ATTTCATGGACATGATTTCGCTTCAGGGGAAGACCAACTTCTTCGAGAAGCGCGTCTCCG 452843 Query 230615 ACTA 230618 |||| Sbjct 452842 ACTA 452839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057820936938380