Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq150 159 4e-34 >seq150 Length=1432513 Score = 159 bits (176), Expect = 4e-34 Identities = 308/452 (68%), Gaps = 2/452 (0%) Strand=Plus/Plus Query 16941 GTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGA 17000 |||| || || | | | | ||||||||| |||||| || | ||||||||| | | | | Sbjct 453157 GTTTCAGGTGCTGATAGAGCAGACATGCAAAATCGGTGTGCATTCCCTCGTCGCGGATTA 453216 Query 17001 TAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCG 17060 | || ||||| || || |||| ||||||||| || || ||||| | ||||||||| | Sbjct 453217 TCAGCTCGTTGGAGAACGTCAGCCCGGGCATGAGCCCGCGCTTCTTAAGCCAAAATATGG 453276 Query 17061 CGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGG 17120 | || || || || || ||||| ||||||||||| | || || || | || ||| || | Sbjct 453277 CAGCAAATGAGCCGGAGAAGAAGATACCCTCGACTGCGGCGAAGGCCACTAGTCGCTCAG 453336 Query 17121 CGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATG 17179 | | | | ||| | ||| ||||| | |||| || || || | ||| ||| Sbjct 453337 CAAAACTTGACCGCTTG-TCCGATATCCAGCGGAGAGCCCAATCCGCCTTCTTCTTGATG 453395 Query 17180 CAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATAC 17239 || || || || ||||| | ||||| ||| || || |||| | || ||| Sbjct 453396 CACGGTATTGTCTCGATGGCGTCAAATAGGCGGTCTCGCTCTTGCGGGTCCTTGATGTAC 453455 Query 17240 GTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCG 17299 || |||||||| || || | ||||| || ||||||||||| ||| || || || Sbjct 453456 GTGTCGATGAGCAGCGAATATGTCTCGGAATGAATGTTCTCCATCATTATTTGGAAGCCA 453515 Query 17300 TAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCG 17359 || || ||||| || ||||| ||| ||||| |||| || || | || || ||| Sbjct 453516 TAGAAACATCGTGCCTCCGCAGCTTGCACTTCATTCGAGAAGCGCTCGACAAGGTTCTCG 453575 Query 17360 TTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 ||||| ||||| ||| |||||||| || || Sbjct 453576 TTCACTATGCCATCGGAGGCGGCGAAGAATGC 453607 Score = 134 bits (148), Expect = 1e-26 Identities = 289/432 (67%), Gaps = 0/432 (0%) Strand=Plus/Minus Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 ||| || || |||||| || | ||||| || | |||||| || ||||| || || || Sbjct 455572 CAGGCAAGCAAAATCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTCGAGAACGT 455513 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 | |||||||| || || ||||| | ||| ||||| | || || || ||||| || Sbjct 455512 GAGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAATATGGACGCAAAGGATCCAGAGAA 455453 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTT 17139 ||| ||||||||||| | || || || | | ||| || || | ||| |||| Sbjct 455452 GAAGATACCCTCGACTGCAGCGAAGGCCACCAGTCGCTCAGCAAAGCTCGACCGCTTGTC 455393 Query 17140 ACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGC 17199 | ||||| | |||| || || || | ||| ||||| || || || ||||| Sbjct 455392 AGCGATCCAGCGGAGAGCCCAGTCCGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGC 455333 Query 17200 CTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTA 17259 | |||| | ||| | || |||| | || || || |||||||| || ||| Sbjct 455332 ATCGAATAGGTGCTCGCGCTGCTTAGGGTCCTTGATGTAGGTGTCGATGAGGAGCGAGTA 455273 Query 17260 CATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGC 17319 | | |||||||| ||||||||||| ||||| || ||||| || || || || || || Sbjct 455272 CGTCTCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAACAGCGCGCCTCAGC 455213 Query 17320 TATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGC 17379 || || || | |||| || || | || || ||||| |||||||||||| || Sbjct 455212 CGCCTGTACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGCCGTCGGAAGC 455153 Query 17380 GGCGAAAAACGC 17391 |||||| || || Sbjct 455152 GGCGAAGAAAGC 455141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544137933680