Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq150 96.9 4e-15 >seq150 Length=1432513 Score = 96.9 bits (106), Expect = 4e-15 Identities = 282/432 (65%), Gaps = 2/432 (0%) Strand=Plus/Plus Query 16181 TTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATA 16240 || ||||| | | | | ||||| || || ||| || | ||| ||||| | | | || Sbjct 453159 TTCAGGTGCTGATAGAGCAGACATGCAAAATCGGTGTGCATTCCCTCGTCGCGGATTATC 453218 Query 16241 AGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCA 16300 || |||||||| || || | ||| ||||| || || ||||| | ||| ||||| ||| Sbjct 453219 AGCTCGTTGGAGAACGTCAGCCCGGGCATGAGCCCGCGCTTCTTAAGCCAAAATATGGCA 453278 Query 16301 GCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCG 16360 |||||||| || || ||||| |||||||| || | || || || | || ||| || || Sbjct 453279 GCAAATGAGCCGGAGAAGAAGATACCCTCGACTGCGGCGAAGGCCACTAGTCGCTCAGCA 453338 Query 16361 TACGTAGCATCTTTATTACGA-ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACA 16419 | | | | | | | ||| ||||| | |||| || || || | || || || Sbjct 453339 AAACTTG-ACCGCTTGTCCGATATCCAGCGGAGAGCCCAATCCGCCTTCTTCTTGATGCA 453397 Query 16420 ATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGT 16479 || || || ||||| | ||| | ||| || || || | || ||||| Sbjct 453398 CGGTATTGTCTCGATGGCGTCAAATAGGCGGTCTCGCTCTTGCGGGTCCTTGATGTACGT 453457 Query 16480 ATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATA 16539 || || || | || | || || || |||||||| || ||| || || ||||| Sbjct 453458 GTCGATGAGCAGCGAATATGTCTCGGAATGAATGTTCTCCATCATTATTTGGAAGCCATA 453517 Query 16540 GAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATT 16599 ||| ||||| |||||||| ||| ||||| | || || || | |||||||| || Sbjct 453518 GAAACATCGTGCCTCCGCAGCTTGCACTTCATTCGAGAAGCGCTCGACAAGGTTCTCGTT 453577 Query 16600 CACGATACCGTC 16611 ||| || || || Sbjct 453578 CACTATGCCATC 453589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511412955254320