Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq183 150 2e-31 >seq183 Length=1202715 Score = 150 bits (166), Expect = 2e-31 Identities = 223/315 (71%), Gaps = 6/315 (2%) Strand=Plus/Plus Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604 ||||| ||| | ||| | || ||| || ||||||||||||| | | ||| |||||| | Sbjct 46261 CATCTTCATCGCGATCGGCGGGTGCGGCTGGTAGCCCTCCACGACCACGTCTTCCGCCGT 46320 Query 145605 GAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGCT 145664 |||||||||||| ||| |||| |||| || | ||| | || || ||||| ||||| Sbjct 46321 GAAGTCATCTATATCCCGCACCTCCCTCGCGAAGCGCAGCTTCGGGAACGGCCGTGGGCT 46380 Query 145665 CCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAG 145724 | | ||||| || || | || ||||||| | |||| ||||||||||| || Sbjct 46381 GCGCTTGAGCTGCTCCTCGAGCGCGTCGACGTGGTCGCGGTACACGTGCGCGTCGCC--- 46437 Query 145725 GACGTGGATGAAGTCCCCG---GGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAG 145781 || ||||||| | | || ||||| ||||||||||||||| | || ||| || Sbjct 46438 GAGCTGGATGATGAGCTCGTGCGGCTCCGTCTGCGTGAGGTGGGCGACGAGGTGGGTGAG 46497 Query 145782 CAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTA 145841 || | ||| || ||||||||||| | || || || | ||| | ||||||||||| Sbjct 46498 GAGCGCGTAAGACGCGATGTTGAAGGGGATGCCGAGGCCGAGGTCGGCGGAGCGCTGGTA 46557 Query 145842 CAGCTGGCAGGAGAG 145856 || |||||||||| Sbjct 46558 GAGGAGGCAGGAGAG 46572 Score = 136 bits (150), Expect = 5e-27 Identities = 217/306 (71%), Gaps = 8/306 (3%) Strand=Plus/Plus Query 145924 GCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGG--GGTTCCTC-TTGATCTCC 145980 || || ||||| ||| |||||| || | | || |||| || ||||| ||||||| Sbjct 46729 GCAGGATTCCATGCGCTGAGGATGA---TGCGGCGGTCGGTAGGGTCCTCCTTGATCTTG 46785 Query 145981 CCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACG 146040 | || ||| ||||||||| ||||||||||| ||| || | | | |||| | Sbjct 46786 CGGATGCACTCCGCGAGCTGGTCGACGCCCTGCCCGGTGTAGTCCGCGTCGCAGTCTGTG 46845 Query 146041 TACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC- 146099 ||| || |||||||||||||||||||| || || || || |||||||| || ||| Sbjct 46846 TACTTCGCGCCGAAGTGCCTCCACTGGAAGCCATACACCGGGCCCAGGTCTCC-TTCTCT 46904 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 ||| |||||||| || | ||||||| ||| | ||| || | ||||| ||||| Sbjct 46905 CCTATGCCCCAGTCCACGCTTCTCGAGGAATTCCTTGCTCCCATTCCCATCCCAAATCTT 46964 Query 146160 GACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTC 146219 || |||| ||||||| || ||||| || || || || | ||||||||| ||||| || Sbjct 46965 GATGCCCTTCGCGGACAGAAGCTTGGAATCAGTCGAGCCGCGGATGAACCATAGCAGTTC 47024 Query 146220 TTCGAG 146225 || || Sbjct 47025 CTCCAG 47030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075133033040