Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 seq199 89.7 4e-13 seq146 84.2 2e-11 seq57 82.4 6e-11 >seq1 Length=2270075 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| |||||| || |||||||| || || || || |||| ||||| | ||||| Sbjct 785656 AGCACCAGATGCAACGTCGACTCCTTCTGGATATTGTAATCCGAGAGGGTACGACCGTCC 785715 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| || || || | || || | ||||||||| || | ||| |||||||| Sbjct 785716 TCAAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCT 785775 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | | ||| || || | ||| |||| ||||||||| Sbjct 785776 TGAATCTTTGCCTTGACATTGTCGATCGTGTCCGATGACTCGACCTCCAACGTAATGGTC 785835 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || ||||| | || || ||||| || ||||| Sbjct 785836 TTCCCGGTGAGAGTCTTCACAAAGATCTGCAT 785867 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| | ||| || || |||| |||| ||| ||||| Sbjct 786180 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGCGTACGGCCGTCTTCCAACTGCTTGCCT 786239 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| |||| || | |||||| ||| || | ||| ||||| || ||||| || Sbjct 786240 GCAAAAATCAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTATCCTGAATCTTAGCCTTA 786299 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || ||| | ||| |||| || || ||||| || || | || Sbjct 786300 ACATTGTCGATTGTGTCAGAGCTCTCGACCTCCAGAGTGATAGTCTTTCCCGTGAGAGTC 786359 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 786360 TTGACAAAGATCTGCAT 786376 >seq199 Length=104010 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 20984 CTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATA 21043 |||||| || ||||||||||| | || || || ||||||| || || ||||| ||| | Sbjct 100317 CTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAA 100258 Query 21044 AATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTG 21103 || || | |||||||| || | || |||||||| ||||| || || | Sbjct 100257 GATCAGGCGTTGCTGGTCAGGCGGGATACCCTCCTTGTCTTGAATCTTCGCCTTGACGTT 100198 Query 21104 GCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGAC 21163 | ||| |||||| || || |||| ||||||||||||||| || | ||| ||||| Sbjct 100197 GTCGATGGTATCAGAGGATTCGACCTCCAGGGTAATGGTCTTGCCCGTGAGCGTCTTGAC 100138 Query 21164 AAATATTTGCAT 21175 || || ||||| Sbjct 100137 GAAAATCTGCAT 100126 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 20984 CTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATA 21043 |||||| |||||||||||||||| || || | | || |||||||| ||||| || | Sbjct 100874 CTCCTTCTGAATGTTATAGTCCGAGAGCGTACGACCATCTTCCAGCTGCTTGCCAGCGAA 100815 Query 21044 AATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTG 21103 || || | ||||||||| || | |||||||||||| |||||| || || | Sbjct 100814 GATCAGGCGCTGCTGGTCAGGCGGAATGCCTTCCTTGTCTTGGATCTTCGCCTTGACGTT 100755 Query 21104 GCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGAC 21163 | ||| || ||| | ||| ||| | || || |||||||| || || || || || Sbjct 100754 GTCGATGGTGTCAGACGACTCGACTTCGAGAGTGATCGTCTTGCCCGTCAAAGTCTTCAC 100695 Query 21164 AAATATTTGCATT 21176 || || |||||| Sbjct 100694 GAAAATCTGCATT 100682 >seq146 Length=609471 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||||| || | ||||||||||| |||||||| ||||| Sbjct 163652 CCACCACGCAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTG 163711 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCC 21062 ||||| | ||||||||||||| ||||| || | || || | |||||||||| Sbjct 163712 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCC 163765 >seq57 Length=802683 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 20976 AAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTG 21035 || ||| |||||| || ||||||||||| | || || || ||||||| || || ||| Sbjct 362833 AAGGTGCTCTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCGTCCTCGAGTTGCTTG 362774 Query 21036 CCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGT 21095 || ||| | || || | |||||||| || | || |||||||| ||||| Sbjct 362773 CCAGCAAAGATCAGGCGTTGCTGGTCAGGCGGGATACCCTCCTTGTCTTGAATCTTCGCC 362714 Query 21096 TTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAAC 21155 || || | | ||| |||||| | || || | ||||||||||||||| || | | Sbjct 362713 TTGACGTTGTCGATGGTATCAGATGATTCGACCTCAAGGGTAATGGTCTTGCCCGTGAGC 362654 Query 21156 GTTTTGACAAATATTTGCAT 21175 || ||||| || || ||||| Sbjct 362653 GTCTTGACGAAAATCTGCAT 362634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258036939816