Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1 132 4e-26 seq199 107 2e-18 seq57 105 6e-18 seq146 86.0 5e-12 >seq1 Length=2270075 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 |||||||| | | | ||||| || | || ||||| || || || |||||||| Sbjct 785641 CCTCCGCGAAGACGAAGCACCAGATGCAACGTCGACTCCTTCTGGATATTGTAATCCGAG 785700 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || || ||||| ||||| || |||||| |||||||||||||||| || ||||| Sbjct 785701 AGGGTACGACCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 785760 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||||||||||||| ||| ||| || || | |||| ||||||| ||||||| Sbjct 785761 ATGCCCTCCTTGTCTTGAATCTTTGCCTTGACATTGTCGATCGTGTCCGATGACTCGACC 785820 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || | || | || || ||||| ||||| || ||||| ||||||||| Sbjct 785821 TCCAACGTAATGGTCTTCCCGGTGAGAGTCTTCACAAAGATCTGCATG 785868 Score = 125 bits (138), Expect = 6e-24 Identities = 157/214 (73%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| || | |||||||| || || ||||||||||| | || | ||||| Sbjct 785430 ACCAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCCGAAAGCGTCCTACCGTCCTC 785489 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || || |||||||||| |||||||| ||||| || |||||||||||| Sbjct 785490 CAGCTGCTTCCCCGCAAAGATGAGACGTTGCTGATCCGGAGGGATACCCTCCTTGTCTTG 785549 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| |||||| | ||||||||||| ||| | ||| || Sbjct 785550 AATCTTCGCCTTCACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATCGTCTT 785609 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||| |||| ||||| || || ||||||||| || Sbjct 785610 GCCAGTCAATGTTTTGACGAAGATCTGCATGCCT 785643 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| ||| || || || ||| |||||||| || ||| Sbjct 785899 GTCGACTCCTTCTGGATGTTGTAGTCGGACAACGTCCGGCCATCTTCGAGCTGCTTCCCA 785958 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| || || |||||||| ||||| || ||||||||||| ||| || || Sbjct 785959 GCGAAGATAAGGCGTTGCTGATCCGGAGGAATACCCTCCTTGTCCTGAATCTTCGCCTTC 786018 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||| | |||||| |||| || | ||| ||||| || || || Sbjct 786019 ACGTTGTCGATCGTGTCAGAAGACTCGACTTCGAGCGTGATCGTCTTGCCCGTGAGGGTC 786078 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 786079 TTAACGAAGATCTGCAT 786095 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || || |||||||||||| || || || |||||||||||| || || Sbjct 786408 GTAGACTCCTTCTGGATGTTGTAATCGGACAGCGTACGACCATCCTCGAGCTGCTTGCCC 786467 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| | |||||||||||||| || || ||||||||||| || || || Sbjct 786468 GCAAAGATCAAGCGCTGCTGATCGGGGGGAATACCCTCCTTGTCCTGGATCTTCGCCTTC 786527 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| | ||||||||||| || | || ||||| || || || Sbjct 786528 ACATTATCAATCGTGTCGGACGACTCGACCTCGAGCGTGATTGTCTTGCCCGTGAGTGTC 786587 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 786588 TTGACAAAGATCTGCAT 786604 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| || || || || || || | ||| || || Sbjct 786180 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGCGTACGGCCGTCTTCCAACTGCTTGCCT 786239 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || || ||||||||||| ||||| ||||||||||| || ||| || ||| Sbjct 786240 GCAAAAATCAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTATCCTGAATCTTAGCCTTA 786299 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||| | |||||||||||| | || | || || || || ||||| Sbjct 786300 ACATTGTCGATTGTGTCAGAGCTCTCGACCTCCAGAGTGATAGTCTTTCCCGTGAGAGTC 786359 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 786360 TTGACAAAGATCTGCAT 786376 >seq199 Length=104010 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | || ||| | ||||| ||| ||| || |||||||| || || Sbjct 100909 CCACCGCGGAGACGCAGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTATAGTCCGAG 100850 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || || ||| || ||||| || |||||| |||| || |||||||| || || || Sbjct 100849 AGCGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGCGGA 100790 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||| ||||||||| || || || || | |||| |||||| | |||||| Sbjct 100789 ATGCCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGACGACTCGACT 100730 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || | ||| ||||| |||| ||| || || ||||||||||| Sbjct 100729 TCGAGAGTGATCGTCTTGCCCGTCAAAGTCTTCACGAAAATCTGCAT 100683 Score = 102 bits (112), Expect = 7e-17 Identities = 150/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| || | ||| |||||| || |||||||||||| | || || ||||| Sbjct 100058 ACCAAGGTGAAGTGTGCTCTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGTCCGTCCTC 99999 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || |||||| |||| || ||||||||||| || || || ||||||||||| Sbjct 99998 TAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGATCCGGTGGAATACCCTCCTTGTCCTG 99939 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| |||||||| ||| || |||| || | || || Sbjct 99938 GATCTTGGCCTTCACATTGTCGATGGTGTCCGATGACTCCACTTCGAGCGTGATGGTCTT 99879 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 ||| || || || || || || ||||||||| Sbjct 99878 GCCAGTAAGGGTCTTGACGAAGATCTGCATG 99848 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || ||||| || ||| | ||||| |||||||| || || ||||| | Sbjct 100317 CTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAA 100258 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| || || ||||| || || || || |||||||||||| ||| || || || | Sbjct 100257 GATCAGGCGTTGCTGGTCAGGCGGGATACCCTCCTTGTCTTGAATCTTCGCCTTGACGTT 100198 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||| || | | |||||||| | ||| | || ||||| || || || || || Sbjct 100197 GTCGATGGTATCAGAGGATTCGACCTCCAGGGTAATGGTCTTGCCCGTGAGCGTCTTGAC 100138 Query 118727 AAAAATCTGCATG 118739 |||||||||||| Sbjct 100137 GAAAATCTGCATG 100125 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| || | || ||| || |||||||| || |||||| | Sbjct 100596 CTCCTTCTGAATGTTGTAGTCAGAGAGCGTTCGCCCGTCTTCGAGCTGCTTGCCAGCGAA 100537 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| | |||||| || || ||||| ||||| |||||||| || || ||||| | Sbjct 100536 GATCAAACGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTAACGTT 100477 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||| | ||||||||| | ||| | || || || ||||| || || || Sbjct 100476 GTCGATTGTGTCGGAAGACTCGACCTCAAGGGTAATAGTCTTTCCTGTCAGGGTCTTGAC 100417 Query 118727 AAAAATCTGCAT 118738 || || ||||| Sbjct 100416 GAAGATTTGCAT 100405 >seq57 Length=802683 Score = 105 bits (116), Expect = 6e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 |||||| || |||||||||||| | || || ||||| ||||| || |||||| | Sbjct 362548 CTCTTTCTGGATGTTGTAATCGGAGAGCGTCCGTCCGTCCTCTAGCTGCTTGCCAGCGAA 362489 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| || ||||||||||| || || || ||||||||||| || ||| || || | Sbjct 362488 GATAAGGCGCTGCTGATCCGGTGGAATACCCTCCTTGTCCTGGATCTTTGCCTTCACATT 362429 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| |||||||| ||| || |||| || | || ||||| || || || || || Sbjct 362428 GTCGATGGTGTCCGAAGACTCCACTTCGAGCGTGATGGTCTTGCCAGTAAGGGTCTTGAC 362369 Query 118727 AAAAATCTGCATG 118739 || ||||||||| Sbjct 362368 GAAGATCTGCATG 362356 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | || ||| | ||||| ||| ||| || |||||||| || || Sbjct 363419 CCACCGCGGAGACGCAGCACGAGGTGGAGAGTACTCTCCTTCTGAATGTTATAGTCCGAG 363360 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| || || || ||||| || |||||| |||| | |||||||| || || || Sbjct 363359 AGAGTACGACCGTCTTCCAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGCGGA 363300 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||| ||||| || ||| || || || | |||| |||||| | ||||||| Sbjct 363299 ATGCCTTCCTTATCCTGAATCTTCGCCTTGACATTGTCGATGGTGTCAGACGACTCGACC 363240 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || | ||| ||||| |||| ||| || || ||||||||||| Sbjct 363239 TCGAGAGTGATCGTCTTGCCCGTCAAAGTCTTCACGAAAATCTGCAT 363193 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || ||||| || ||| | ||||| |||||||| || || ||||| | Sbjct 362825 CTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAA 362766 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| || || ||||| || || || || |||||||||||| ||| || || || | Sbjct 362765 GATCAGGCGTTGCTGGTCAGGCGGGATACCCTCCTTGTCTTGAATCTTCGCCTTGACGTT 362706 Query 118667 TTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 118725 |||| ||| || | || | |||||||| | ||| | || ||||| || || || || | Sbjct 362705 GTCGATGGTATCAGATGAT-TCGACCTCAAGGGTAATGGTCTTGCCCGTGAGCGTCTTGA 362647 Query 118726 CAAAAATCTGCATG 118739 | |||||||||||| Sbjct 362646 CGAAAATCTGCATG 362633 >seq146 Length=609471 Score = 86.0 bits (94), Expect = 5e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||||| || ||||| || ||||||||||| ||||| | ||||| ||||| Sbjct 163669 CACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGTCCGTCCTC 163728 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 ||||| || || ||| |||| || |||||||| || || || |||| Sbjct 163729 CAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGC 163775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829205068392