Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq143 107 4e-18 >seq143 Length=661151 Score = 107 bits (118), Expect = 4e-18 Identities = 230/339 (68%), Gaps = 6/339 (2%) Strand=Plus/Plus Query 248826 CTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGA 248885 ||||| |||||||| || ||| || || |||||||| | |||| ||| || Sbjct 572540 CTTTGGCTTCAAAACCCTTGAGCGGTCATACCTCCTCAAGCTCAATGGGCGCGTCGCCGA 572599 Query 248886 ACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGAT--GACATAGAG 248943 || |||||||||| | ||||| || |||||||| ||||| || | ||||| ||| Sbjct 572600 GCGTCCTCAGCACATGCTCATGCGTGTTGCTGTCGGCATTCAT--GGCTCCGACATCGAG 572657 Query 248944 AGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACG 249003 | ||| ||||||| |||| | ||| | || | | ||||| || |||| || Sbjct 572658 CGAGTGATCGAGACCTACAACCTGATGTCTCTCCGTTACTTCACACACGCATCACCCACA 572717 Query 249004 CTCTTCAACGCCGGTACCGTCA-ACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCA 249062 || ||||| || || || | || || ||||||||||| ||||| || | ||| | Sbjct 572718 CTGTTCAATGCTGGCAC-GCCACACCCCCAGCTGAGCTCATGCTTCCTCGTGTGTATGAA 572776 Query 249063 AGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCTAAATT 249122 |||||||| |||| || ||||| |||||||| || | || | ||| ||| Sbjct 572777 GGACGACTCCATCGAGGGTATTTACGACACGCTCAAGAACTGTGCCATGATCAGTAAGAC 572836 Query 249123 CGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGC 249161 |||||||| ||||| ||| | | ||||||||| || Sbjct 572837 TGCGGGCGGTATCGGCCTCAGCATTCACAACATCCGTGC 572875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073763290775168