Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06]
226 sequences; 43,856,698 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq150 230 2e-55
seq57 125 6e-24
seq199 122 8e-23
seq143 122 8e-23
seq1 84.2 2e-11
>seq150
Length=1432513
Score = 230 bits (254), Expect = 2e-55
Identities = 391/564 (69%), Gaps = 11/564 (2%)
Strand=Plus/Minus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| ||||||||| | || || ||||| || ||||| | ||||| |||||||
Sbjct 453736 ATCTGGCGCATGTACAAGCAAGCCGAGGCATCTTTCTGGACAGCGGAAGAGATAGACCTT 453677
Query 57630 TCTAAGGATCTGAGCGATTGGGAT--TC-CCTCAAAGAATCTGAGAGAAATTTTATTAAA 57686
|| | || | | || ||| | || |||||| || ||| | | || ||
Sbjct 453676 TCACACGACCACTGGGACTGGAACCATCGCCTCAACGACGACGAGCGGCACTTCATCTCG 453617
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
||||| | || || |||||||| |||||||| || || |||||||| | ||||| |
Sbjct 453616 CACGTCCTCGCATTCTTCGCCGCCTCCGATGGCATAGTGAACGAGAACCTTGTCGAGCGC 453557
Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806
|| || | |||||||||| ||||||| |||| || || || || ||| | ||
Sbjct 453556 TTCTCGAATGAAGTGCAAGCTGCGGAGGCACGATGTTTCTATGGCTTCCAAATAATGATG 453497
Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866
|| ||| | ||||| || | |||||||| |||||||| |||||| | |||||| |
Sbjct 453496 GAGAACATTCATTCCGAGACATATTCGCTGCTCATCGACACGTACATCAAGGACCCGCAA 453437
Query 57867 GAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAG 57926
||| | | || || |||| ||||| ||||| || ||| |||||||| ||
Sbjct 453436 GAGCGAGACCGCCTATTTGACGCCATCGAGACAATACCGTGCATCAAGAAGAAGGCGGAT 453377
Query 57927 TGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGC 57982
||| | || |||||| | ||||| | | | || || ||| | ||| | ||
Sbjct 453376 TGGGCTCTCCGCTGGATATCGGACAAGCG----GTCAAGTTTTGCTGAGCGACTAGTGGC 453321
Query 57983 GTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAA 58042
|||||||| ||||| ||||| ||||| || ||| ||||| || ||||||||| | ||
Sbjct 453320 CTTCGCCGCAGTCGAGGGTATCTTCTTCTCCGGCTCATTTGCTGCCATATTTTGGCTTAA 453261
Query 58043 GAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGG 58102
||| ||||| || |||||||| |||||||| ||||||| ||||| |||||||||||
Sbjct 453260 GAAGCGCGGGCTCATGCCCGGGCTGACGTTCTCCAACGAGCTGATAATCCGCGACGAGGG 453201
Query 58103 TCTCCATACTGATTTTGCGTGCCT 58126
| || || |||||||| || ||
Sbjct 453200 AATGCACACCGATTTTGCATGTCT 453177
Score = 163 bits (180), Expect = 3e-35
Identities = 380/567 (67%), Gaps = 17/567 (3%)
Strand=Plus/Plus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | |||||||| ||||| || || || || ||||| ||||| || | |||||
Sbjct 455012 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACGGTCGAGGAGATCGACCTC 455071
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCA---AAGAATCTGAGAGAAATTTTATTAAA 57686
|| ||||| || ||| ||| | || || | || ||| || | || ||
Sbjct 455072 TCCAAGGACCTCCACGACTGGAACAACCGCATGAACGACAACGAGCGACACTTCATCTCC 455131
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
|| || | || || |||||||| ||||| || || || |||||||| | ||||| |
Sbjct 455132 CATGTCCTTGCTTTCTTCGCCGCTTCCGACGGCATCGTCAACGAGAACCTTGTCGAGCGT 455191
Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806
|| || | || || || | | | |||||| | || || ||||| || || | ||
Sbjct 455192 TTCTCCAACGAGGTACAGGCGGCTGAGGCGCGCTGTTTCTACGGCTTCCAGATTATGATG 455251
Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866
|| ||| | || || || | ||| ||||| |||||||| || ||| | |||||| | |
Sbjct 455252 GAGAACATCCACTCCGAGACGTACTCGCTCCTCATCGACACCTACATCAAGGACC-CTA- 455309
Query 57867 GAGAAACGT-AGA--CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923
|| | || || || ||| | || ||||| || || ||| ||| ||||||||
Sbjct 455310 -AGCAGCGCGAGCACCTATTCGATGCCATCGACACCATCCCCTGCATCAAGAAGAAGGCG 455368
Query 57924 GAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAAT 57979
|| ||| | || ||||| | ||||| | | | || || ||| | || |
Sbjct 455369 GACTGGGCTCTCCGCTGGATCGCTGACAAGCG----GTCGAGCTTTGCTGAGCGACTGGT 455424
Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039
|| ||||| || ||||| ||||| ||||| || || ||||||| | ||||| ||| |
Sbjct 455425 GGCCTTCGCTGCAGTCGAGGGTATCTTCTTCTCTGGATCCTTTGCGTCCATATTCTGGCT 455484
Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099
||||| || || || ||||||||||| ||||| |||||| | || || || ||
Sbjct 455485 CAAGAAGCGTGGTCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCATCAGCCGTGATGA 455544
Query 58100 GGGTCTCCATACTGATTTTGCGTGCCT 58126
||| | || || |||||||| |||||
Sbjct 455545 GGGCATGCACACCGATTTTGCTTGCCT 455571
>seq57
Length=802683
Score = 125 bits (138), Expect = 6e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| |||||| |||| ||||| |||||||| |||| || || ||||
Sbjct 363193 ATGCAGATTTTCGTGAAGACTTTGACGGGCAAGACGATCACTCTCGAGGTCGAGTCGTCT 363252
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| || || ||| ||||||||| | ||||| ||||||
Sbjct 363253 GACACCATCGACAATGTCAAGGCGAAGATTCAGGATAAGGAAGGCATTCCGCCTGACCAG 363312
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| | || ||||||||||| ||| |||||||| | ||| | || ||||||
Sbjct 363313 CAGCGCTTGATCTTCGCTGGCAAGCAGCTGGAAGACGGTCGTACTCTCTCGGACTATAAC 363372
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || ||||| || || || ||
Sbjct 363373 ATTCAGAAGGAGAGTACTCTCCACCTCGTGCT 363404
Score = 102 bits (112), Expect = 7e-17
Identities = 116/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| |||||||||||||| || || || ||| | || || || | |||
Sbjct 362915 ATGCAAATCTTCGTCAAGACTCTGACAGGAAAGACTATTACCCTTGAGGTCGAGTCTTCC 362974
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || || || ||||||||||||| | || || |||||
Sbjct 362975 GACACAATCGACAACGTTAAGGCGAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAA 363034
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348
|||||| | || |||||||| || ||| | ||||||
Sbjct 363035 CAGCGTTTGATCTTCGCTGGTAAGCAGCTAGAAGAC 363070
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/213 (70%), Gaps = 3/213 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| || || ||||| || ||||| |||| || || | ||
Sbjct 362356 CATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACGCTCGAAGTGGAGTCTTC 362415
Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
|||| |||| | || || || ||| | ||||||||| || | || || || |
Sbjct 362416 GGACACCATCGACAATGTGAAGGCAAAGA-TCCAGGACAAGGAGGGTATTCCACCGGATC 362474
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
||||||| || || ||||||||||| ||| | || ||| ||| | |||||| |
Sbjct 362475 AGCAGCGCCTTATCTTCGCTGGCAAGCAGCTAGAGGACGGACGGACGCTCTCCGATTACA 362534
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCT-GGTA 31402
|||| || ||||| || ||||| || ||||
Sbjct 362535 ACATCCAGAAAGAGAGCACACTTCACCTCGGTA 362567
>seq199
Length=104010
Score = 122 bits (134), Expect = 8e-23
Identities = 120/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| |||||| |||| ||||| |||||||| |||| || || ||||
Sbjct 100683 ATGCAGATTTTCGTGAAGACTTTGACGGGCAAGACGATCACTCTCGAAGTCGAGTCGTCT 100742
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| || || |||||||||||| | ||||| ||||||
Sbjct 100743 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGCATTCCGCCTGACCAG 100802
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||| || || ||||||||||| ||| |||||||
Sbjct 100803 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAAGA 100837
Score = 102 bits (112), Expect = 7e-17
Identities = 116/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| |||||||| || || || ||| | || || || | |||
Sbjct 100405 ATGCAAATCTTCGTCAAGACCCTGACAGGAAAGACTATTACCCTTGAGGTCGAGTCTTCC 100464
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || || || ||||||||||||| | || || |||||
Sbjct 100465 GACACAATCGACAACGTTAAGGCGAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAA 100524
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348
|||||| | || ||||||||||| ||| | ||||||
Sbjct 100525 CAGCGTTTGATCTTCGCTGGCAAGCAGCTCGAAGAC 100560
Score = 82.4 bits (90), Expect = 7e-11
Identities = 146/212 (69%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| || || ||||| || ||||| |||| || || | ||
Sbjct 99848 CATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACGCTCGAAGTGGAGTCATC 99907
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | || || | || ||||||||| || | || || || ||
Sbjct 99908 GGACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCGGATCA 99967
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || ||||||||||| ||| | || ||| ||| | |||||| ||
Sbjct 99968 GCAGCGCCTTATCTTCGCTGGCAAGCAGCTAGAGGACGGACGGACGCTCTCCGATTACAA 100027
Query 31372 CATTCAAAAAGAATCGACTCTTCATC-TGGTA 31402
||| || ||||| || ||||| | |||||
Sbjct 100028 CATCCAGAAAGAGAGCACACTTCACCTTGGTA 100059
>seq143
Length=661151
Score = 122 bits (134), Expect = 8e-23
Identities = 254/377 (67%), Gaps = 11/377 (3%)
Strand=Plus/Minus
Query 22505 GTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATC 22564
||| | || ||||| | || ||||| |||| |||||| ||||| || ||||||||
Sbjct 574118 GTGTAAGGCTCGAAGCACTCGTTGTTGCCCAAAATCTGACTTGTCGACGCTGTCGGCATA 574059
Query 22565 GGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGAC 22624
||||| | || |||||||| |||| ||| ||| | | || ||||||| | |
Sbjct 574058 GGCGCAACAAGAAGCGAGTTCCTCAGGCCCGTCTTCGCCACCTTCTCCTTGAGCGATGCC 573999
Query 22625 CAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGA 22684
|||||||||| || | ||||| ||| |||||| || || || | | ||| |
Sbjct 573998 CAGTCCCACAAGTCTGTTGGCGTAACA---CCCCACAGGTCATACTGAAGCTGGCCCTGG 573942
Query 22685 CTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTC 22744
|| || ||||| | |||||| ||||| ||||||| | ||| || | || | ||||
Sbjct 573941 GATGCAGGACTGCCCTGGTACGTCTCGTATGGACCATCGACCGCAGCGATCTCACTGCTC 573882
Query 22745 GCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC---- 22800
||||| | ||| | | ||||| ||||| ||| ||||||| | || ||
Sbjct 573881 GCCTCGACCGCAGCATGGTATATCGTCTCCGCGATCCTCTTGTTGAGGTCACGTGCTTCG 573822
Query 22801 GGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCC 22860
||||| ||| | ||||| || | || ||| ||||| || | ||||| || ||
Sbjct 573821 GGCGA----GTCGAAGGGCATGCGGAGGGCCATGAAAGCGTCGGCGAGGCCCTGCACACC 573766
Query 22861 TATACCGATCGGTCGGT 22877
||||||||||| ||||
Sbjct 573765 GATACCGATCGGACGGT 573749
>seq1
Length=2270075
Score = 84.2 bits (92), Expect = 2e-11
Identities = 149/215 (69%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || || || |||||||| || || || || || || | || || || | ||
Sbjct 785868 CATGCAGATCTTTGTGAAGACTCTCACCGGGAAGACCATTACGTTGGAGGTCGAGTCATC 785809
Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
|||| |||| | ||||| || ||| | | ||||||| ||| | || || ||||
Sbjct 785808 GGACACGATCGACAATGTCAAGGCAAAGATTCAAG-ACAAGGAGGGCATCCCTCCTGACC 785750
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
|||||||||| || |||||||| || ||| | || ||| | || | ||||| |
Sbjct 785749 AGCAGCGTCTCATCTTCGCTGGGAAGCAGCTTGAGGACGGTCGTACCCTCTCGGATTACA 785690
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
| || || || || ||||| | |||||||| |||
Sbjct 785689 ATATCCAGAAGGAGTCGACGTTGCATCTGGTGCTT 785655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765140709920
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