Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq150 230 2e-55 seq57 125 6e-24 seq199 122 8e-23 seq143 122 8e-23 seq1 84.2 2e-11 >seq150 Length=1432513 Score = 230 bits (254), Expect = 2e-55 Identities = 391/564 (69%), Gaps = 11/564 (2%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| ||||||||| | || || ||||| || ||||| | ||||| ||||||| Sbjct 453736 ATCTGGCGCATGTACAAGCAAGCCGAGGCATCTTTCTGGACAGCGGAAGAGATAGACCTT 453677 Query 57630 TCTAAGGATCTGAGCGATTGGGAT--TC-CCTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || | || | | || ||| | || |||||| || ||| | | || || Sbjct 453676 TCACACGACCACTGGGACTGGAACCATCGCCTCAACGACGACGAGCGGCACTTCATCTCG 453617 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || |||||||| |||||||| || || |||||||| | ||||| | Sbjct 453616 CACGTCCTCGCATTCTTCGCCGCCTCCGATGGCATAGTGAACGAGAACCTTGTCGAGCGC 453557 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || | |||||||||| ||||||| |||| || || || || ||| | || Sbjct 453556 TTCTCGAATGAAGTGCAAGCTGCGGAGGCACGATGTTTCTATGGCTTCCAAATAATGATG 453497 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | ||||| || | |||||||| |||||||| |||||| | |||||| | Sbjct 453496 GAGAACATTCATTCCGAGACATATTCGCTGCTCATCGACACGTACATCAAGGACCCGCAA 453437 Query 57867 GAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAG 57926 ||| | | || || |||| ||||| ||||| || ||| |||||||| || Sbjct 453436 GAGCGAGACCGCCTATTTGACGCCATCGAGACAATACCGTGCATCAAGAAGAAGGCGGAT 453377 Query 57927 TGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGC 57982 ||| | || |||||| | ||||| | | | || || ||| | ||| | || Sbjct 453376 TGGGCTCTCCGCTGGATATCGGACAAGCG----GTCAAGTTTTGCTGAGCGACTAGTGGC 453321 Query 57983 GTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAA 58042 |||||||| ||||| ||||| ||||| || ||| ||||| || ||||||||| | || Sbjct 453320 CTTCGCCGCAGTCGAGGGTATCTTCTTCTCCGGCTCATTTGCTGCCATATTTTGGCTTAA 453261 Query 58043 GAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGG 58102 ||| ||||| || |||||||| |||||||| ||||||| ||||| ||||||||||| Sbjct 453260 GAAGCGCGGGCTCATGCCCGGGCTGACGTTCTCCAACGAGCTGATAATCCGCGACGAGGG 453201 Query 58103 TCTCCATACTGATTTTGCGTGCCT 58126 | || || |||||||| || || Sbjct 453200 AATGCACACCGATTTTGCATGTCT 453177 Score = 163 bits (180), Expect = 3e-35 Identities = 380/567 (67%), Gaps = 17/567 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| || || || || ||||| ||||| || | ||||| Sbjct 455012 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACGGTCGAGGAGATCGACCTC 455071 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTCA---AAGAATCTGAGAGAAATTTTATTAAA 57686 || ||||| || ||| ||| | || || | || ||| || | || || Sbjct 455072 TCCAAGGACCTCCACGACTGGAACAACCGCATGAACGACAACGAGCGACACTTCATCTCC 455131 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 || || | || || |||||||| ||||| || || || |||||||| | ||||| | Sbjct 455132 CATGTCCTTGCTTTCTTCGCCGCTTCCGACGGCATCGTCAACGAGAACCTTGTCGAGCGT 455191 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || | || || || | | | |||||| | || || ||||| || || | || Sbjct 455192 TTCTCCAACGAGGTACAGGCGGCTGAGGCGCGCTGTTTCTACGGCTTCCAGATTATGATG 455251 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || || || | ||| ||||| |||||||| || ||| | |||||| | | Sbjct 455252 GAGAACATCCACTCCGAGACGTACTCGCTCCTCATCGACACCTACATCAAGGACC-CTA- 455309 Query 57867 GAGAAACGT-AGA--CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923 || | || || || ||| | || ||||| || || ||| ||| |||||||| Sbjct 455310 -AGCAGCGCGAGCACCTATTCGATGCCATCGACACCATCCCCTGCATCAAGAAGAAGGCG 455368 Query 57924 GAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAAT 57979 || ||| | || ||||| | ||||| | | | || || ||| | || | Sbjct 455369 GACTGGGCTCTCCGCTGGATCGCTGACAAGCG----GTCGAGCTTTGCTGAGCGACTGGT 455424 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039 || ||||| || ||||| ||||| ||||| || || ||||||| | ||||| ||| | Sbjct 455425 GGCCTTCGCTGCAGTCGAGGGTATCTTCTTCTCTGGATCCTTTGCGTCCATATTCTGGCT 455484 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 ||||| || || || ||||||||||| ||||| |||||| | || || || || Sbjct 455485 CAAGAAGCGTGGTCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCATCAGCCGTGATGA 455544 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCT 58126 ||| | || || |||||||| ||||| Sbjct 455545 GGGCATGCACACCGATTTTGCTTGCCT 455571 >seq57 Length=802683 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||| |||| ||||| |||||||| |||| || || |||| Sbjct 363193 ATGCAGATTTTCGTGAAGACTTTGACGGGCAAGACGATCACTCTCGAGGTCGAGTCGTCT 363252 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || ||| ||||||||| | ||||| |||||| Sbjct 363253 GACACCATCGACAATGTCAAGGCGAAGATTCAGGATAAGGAAGGCATTCCGCCTGACCAG 363312 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||||||||| ||| |||||||| | ||| | || |||||| Sbjct 363313 CAGCGCTTGATCTTCGCTGGCAAGCAGCTGGAAGACGGTCGTACTCTCTCGGACTATAAC 363372 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || ||||| || || || || Sbjct 363373 ATTCAGAAGGAGAGTACTCTCCACCTCGTGCT 363404 Score = 102 bits (112), Expect = 7e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||||||||||| || || || ||| | || || || | ||| Sbjct 362915 ATGCAAATCTTCGTCAAGACTCTGACAGGAAAGACTATTACCCTTGAGGTCGAGTCTTCC 362974 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||||||||||||| | || || ||||| Sbjct 362975 GACACAATCGACAACGTTAAGGCGAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAA 363034 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||||| | || |||||||| || ||| | |||||| Sbjct 363035 CAGCGTTTGATCTTCGCTGGTAAGCAGCTAGAAGAC 363070 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/213 (70%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || ||||| |||| || || | || Sbjct 362356 CATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACGCTCGAAGTGGAGTCTTC 362415 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 |||| |||| | || || || ||| | ||||||||| || | || || || | Sbjct 362416 GGACACCATCGACAATGTGAAGGCAAAGA-TCCAGGACAAGGAGGGTATTCCACCGGATC 362474 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 ||||||| || || ||||||||||| ||| | || ||| ||| | |||||| | Sbjct 362475 AGCAGCGCCTTATCTTCGCTGGCAAGCAGCTAGAGGACGGACGGACGCTCTCCGATTACA 362534 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCT-GGTA 31402 |||| || ||||| || ||||| || |||| Sbjct 362535 ACATCCAGAAAGAGAGCACACTTCACCTCGGTA 362567 >seq199 Length=104010 Score = 122 bits (134), Expect = 8e-23 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||| |||| ||||| |||||||| |||| || || |||| Sbjct 100683 ATGCAGATTTTCGTGAAGACTTTGACGGGCAAGACGATCACTCTCGAAGTCGAGTCGTCT 100742 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || |||||||||||| | ||||| |||||| Sbjct 100743 GACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGCATTCCGCCTGACCAG 100802 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||| || || ||||||||||| ||| ||||||| Sbjct 100803 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAAGA 100837 Score = 102 bits (112), Expect = 7e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| |||||||| || || || ||| | || || || | ||| Sbjct 100405 ATGCAAATCTTCGTCAAGACCCTGACAGGAAAGACTATTACCCTTGAGGTCGAGTCTTCC 100464 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||||||||||||| | || || ||||| Sbjct 100465 GACACAATCGACAACGTTAAGGCGAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAA 100524 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||||| | || ||||||||||| ||| | |||||| Sbjct 100525 CAGCGTTTGATCTTCGCTGGCAAGCAGCTCGAAGAC 100560 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/212 (69%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || ||||| |||| || || | || Sbjct 99848 CATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACGCTCGAAGTGGAGTCATC 99907 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || | || ||||||||| || | || || || || Sbjct 99908 GGACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCGGATCA 99967 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||||||||| ||| | || ||| ||| | |||||| || Sbjct 99968 GCAGCGCCTTATCTTCGCTGGCAAGCAGCTAGAGGACGGACGGACGCTCTCCGATTACAA 100027 Query 31372 CATTCAAAAAGAATCGACTCTTCATC-TGGTA 31402 ||| || ||||| || ||||| | ||||| Sbjct 100028 CATCCAGAAAGAGAGCACACTTCACCTTGGTA 100059 >seq143 Length=661151 Score = 122 bits (134), Expect = 8e-23 Identities = 254/377 (67%), Gaps = 11/377 (3%) Strand=Plus/Minus Query 22505 GTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATC 22564 ||| | || ||||| | || ||||| |||| |||||| ||||| || |||||||| Sbjct 574118 GTGTAAGGCTCGAAGCACTCGTTGTTGCCCAAAATCTGACTTGTCGACGCTGTCGGCATA 574059 Query 22565 GGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGAC 22624 ||||| | || |||||||| |||| ||| ||| | | || ||||||| | | Sbjct 574058 GGCGCAACAAGAAGCGAGTTCCTCAGGCCCGTCTTCGCCACCTTCTCCTTGAGCGATGCC 573999 Query 22625 CAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGA 22684 |||||||||| || | ||||| ||| |||||| || || || | | ||| | Sbjct 573998 CAGTCCCACAAGTCTGTTGGCGTAACA---CCCCACAGGTCATACTGAAGCTGGCCCTGG 573942 Query 22685 CTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTC 22744 || || ||||| | |||||| ||||| ||||||| | ||| || | || | |||| Sbjct 573941 GATGCAGGACTGCCCTGGTACGTCTCGTATGGACCATCGACCGCAGCGATCTCACTGCTC 573882 Query 22745 GCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC---- 22800 ||||| | ||| | | ||||| ||||| ||| ||||||| | || || Sbjct 573881 GCCTCGACCGCAGCATGGTATATCGTCTCCGCGATCCTCTTGTTGAGGTCACGTGCTTCG 573822 Query 22801 GGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCC 22860 ||||| ||| | ||||| || | || ||| ||||| || | ||||| || || Sbjct 573821 GGCGA----GTCGAAGGGCATGCGGAGGGCCATGAAAGCGTCGGCGAGGCCCTGCACACC 573766 Query 22861 TATACCGATCGGTCGGT 22877 ||||||||||| |||| Sbjct 573765 GATACCGATCGGACGGT 573749 >seq1 Length=2270075 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/215 (69%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || |||||||| || || || || || || | || || || | || Sbjct 785868 CATGCAGATCTTTGTGAAGACTCTCACCGGGAAGACCATTACGTTGGAGGTCGAGTCATC 785809 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 |||| |||| | ||||| || ||| | | ||||||| ||| | || || |||| Sbjct 785808 GGACACGATCGACAATGTCAAGGCAAAGATTCAAG-ACAAGGAGGGCATCCCTCCTGACC 785750 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 |||||||||| || |||||||| || ||| | || ||| | || | ||||| | Sbjct 785749 AGCAGCGTCTCATCTTCGCTGGGAAGCAGCTTGAGGACGGTCGTACCCTCTCGGATTACA 785690 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 | || || || || ||||| | |||||||| ||| Sbjct 785689 ATATCCAGAAGGAGTCGACGTTGCATCTGGTGCTT 785655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765140709920