Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq143 114 3e-20 >seq143 Length=661151 Score = 114 bits (126), Expect = 3e-20 Identities = 187/267 (70%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| | || ||||| || || |||||||| ||| || || | ||| || || Sbjct 572863 TGAATGCTGAGGCCGATACCGCCCGCAGTCTTACTGATCATGGCACAGTTCTTGAGCGTG 572804 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 || ||||||||||| ||| || || | | | || |||||||| ||| || ||| Sbjct 572803 TCGTAAATACCCTCGATGGAGTCGTCCTTCATACACACGAGGAAGCATGAGCTCAGCTGG 572744 Query 94894 GG-TGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952 || |||| | || ||| ||| ||||||||||| || || || || || || | || Sbjct 572743 GGGTGTGGC-GTGCCAGCATTGAACAGTGTGGGTGATGCGTGTGTGAAGTAACGGAGAGA 572685 Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCAC 95012 ||| || | || || || || || | |||||| || || |||||||||||||| || Sbjct 572684 CATCAGGTTGTAGGTCTCGATCACTCGCTCGATGTCGGAGCCATGAATGCCGACAGCAAC 572625 Query 95013 ACGCATAATCATGTCCTGAGGGCGCTC 95039 |||||| | ||||| |||||| ||||| Sbjct 572624 ACGCATGAGCATGTGCTGAGGACGCTC 572598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581134535830