Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq150 159 5e-34 >seq150 Length=1432513 Score = 159 bits (176), Expect = 5e-34 Identities = 295/432 (68%), Gaps = 3/432 (1%) Strand=Plus/Plus Query 36154 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 36213 || |||||| |||||| ||| | |||||||| | | || | |||||||| ||||| Sbjct 453176 CAGACATGCAAAATCGGTGTGCATTCCCTCGTCGCGGATTATCAGCTCGTTGGAGAACGT 453235 Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 36273 || |||||||| || || ||||| |||||||||||||||| |||||||| || || || Sbjct 453236 CAGCCCGGGCATGAGCCCGCGCTTCTTAAGCCAAAATATGGCAGCAAATGAGCCGGAGAA 453295 Query 36274 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCAC---TGTC 36330 ||| || || || ||||| || ||||| | |||| ||| || ||| | | |||| Sbjct 453296 GAAGATACCCTCGACTGCGGCGAAGGCCACTAGTCGCTCAGCAAAACTTGACCGCTTGTC 453355 Query 36331 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 36390 |||||| |||||||||| |||||||| || | || || |||||||| || || Sbjct 453356 CGATATCCAGCGGAGAGCCCAATCCGCCTTCTTCTTGATGCACGGTATTGTCTCGATGGC 453415 Query 36391 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 36450 | ||| || || | || | || || | || || || || | || ||| Sbjct 453416 GTCAAATAGGCGGTCTCGCTCTTGCGGGTCCTTGATGTACGTGTCGATGAGCAGCGAATA 453475 Query 36451 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGT 36510 | || ||||||||||| || || ||||| || || |||||||||| ||||| | Sbjct 453476 TGTCTCGGAATGAATGTTCTCCATCATTATTTGGAAGCCATAGAAACATCGTGCCTCCGC 453535 Query 36511 AATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 36570 | || ||||| | | || || || | | || || |||||||| || || ||| Sbjct 453536 AGCTTGCACTTCATTCGAGAAGCGCTCGACAAGGTTCTCGTTCACTATGCCATCGGAGGC 453595 Query 36571 TGCAAAAAACGC 36582 || || || || Sbjct 453596 GGCGAAGAATGC 453607 Score = 145 bits (160), Expect = 1e-29 Identities = 369/557 (66%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || || |||||| ||| | ||||| || | || || | ||||| || |||||||| Sbjct 455568 CAAGCAAAATCGGTGTGCATGCCCTCATCACGGCTGATGAGCTCGTTCGAGAACGTGAGG 455509 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 |||||||| || |||||||| || ||||| |||||||||||||| |||||||| ||||| Sbjct 455508 CCGGGCATGAGACCACGCTTCTTGAGCCAGAATATGGACGCAAAGGATCCAGAGAAGAAG 455449 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGC--ACTGTCATGT 36334 || || || ||||| || ||||| | |||| ||| || | | || | ||||| Sbjct 455448 ATACCCTCGACTGCAGCGAAGGCCACCAGTCGCTCAGCAAAGCTCGACCGCTTGTCAGCG 455389 Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394 ||||| ||||||| || |||||||| || | || || || || || || |||| Sbjct 455388 ATCCAGCGGAGAGCCCAGTCCGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCATCG 455329 Query 36395 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 36454 || || | | | ||| || || | || || || || | || ||| | Sbjct 455328 AATAGGTGCTCGCGCTGCTTAGGGTCCTTGATGTAGGTGTCGATGAGGAGCGAGTACGTC 455269 Query 36455 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 36514 || || || ||||| || || || || || ||||||||||| | ||||| | | Sbjct 455268 TCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAACAGCGCGCCTCAGCCGCC 455209 Query 36515 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 36574 ||||| || | | || || || | | || || || || || ||||| || || Sbjct 455208 TGTACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGCCGTCGGAAGCGGCG 455149 Query 36575 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGT--GTTAGTTTATTCCAA 36631 || || || | ||||| || || | | ||||| | || | | || ||||| Sbjct 455148 AAGAAAGCAAGGACATGGGAGATGAAGTGTCGCTCGTTGTCGTTCATGCGGTTGTTCCAG 455089 Query 36632 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 36691 || | || || || || | || | || || || ||||| ||||| ||||| ||||| Sbjct 455088 TCGTGGAGGTCCTTGGAGAGGTCGATCTCCTCGACCGTCCAGAATGAGGCCTCGGCCTTC 455029 Query 36692 TTATACATATTCCAGAT 36708 || ||||| | |||||| Sbjct 455028 TTGTACATCTGCCAGAT 455012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658170940661840